myRT

myRT report for GCA_000304255.1_ECAD30.1

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Seq: AMSK01000036.1 Escherichia coli AD30 1.ECAD30.1_36, whole genome shotgun sequence (34193 bp)
Overview 1 RT 1: 22981-26135 bp Neighborhood of RT #1 [22981, 26152] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 22981-23457 bp Ori: EKJ80435.1 Feature: domain Description: PRK10724 Location: 22987-23455 bp Feature: domain Description: PRK1 0724 Location: 22987-23455 bp Feature: gene Location: 23589-24071 bp Ori: EKJ80436.1 Feature: domain Description: SmpB Location: 23619-24066 bp Feature: domain Description: SmpB Location: 2361 9-24066 bp Feature: gene Location: 24757-25530 bp Ori: EKJ80437.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 24892-25345 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 24892-25345 bp Feature: gene Location: 25499-25672 bp Feature: gene Location: 25934-26152 bp Ori: EKJ80439.1 Feature: domain Description: PRK09678 Location: 25937-26135 bp Feature: domain Description: PRK09678 Location: 25937-261 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: AMSK01000041.1 Escherichia coli AD30 1.ECAD30.1_41, whole genome shotgun sequence (24555 bp)
Overview 1 RT 1: 9094-11429 bp Neighborhood of RT #1 [9094, 11429] PHA02517 group_II_RT_mat RVT-GII RVT-GII Feature: gene Location: 9094-9273 bp Ori: EKJ80259.1 Feature: domain Description: PHA02517 Location: 9097-9229 bp Feature: domain Description: PHA02 517 Location: 9097-92 2 9 bp Feature: gene Location: 9402-9974 bp Ori: EKJ80260.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 9408-9720 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 9408-972 0 bp Feature: gene Location: 9946-10212 bp Ori: EKJ80261.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9955-10123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9955-1012 3 bp Feature: gene Location: 10322-10789 bp Ori: EKJ80262.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10595-10766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10595-10766 bp Feature: gene Location: 10957-11085 bp Feature: gene Location: 11313-11429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), group_II_RT_mat (TIGR04416), RVT-GII