myRT

myRT report for GCA_000304915.2_ASM30491v2

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Seq: JH966158.1 Vibrio cholerae CP1035(8) genomic scaffold vcoCP1035.contig.22, whole genome shotgun sequence (9529 bp)
Overview 1 RT 1: 3585-9140 bp Neighborhood of RT #1 [3585, 9140] Prim_Zn_Ribbon Toprim_3 RVT-UG4 PRK09776 PAS_9 PleD Feature: gene Location: 3585-4652 bp Ori: EKL02951.1 Feature: domain Description: Prim_Zn_Ribbon Location: 3696-3810 bp Feature: domain Description: Prim_Zn_Ribbon Location: 3696-381 0 bp Feature: domain Description: Toprim_3 Location: 4332-4626 bp Feature: domain Description: Toprim_3 Location: 4332-4626 bp Feature: gene Location: 4742-5449 bp Feature: gene Location: 5566-6318 bp Ori: EKL02953.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5962-6217 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5962-621 7 bp Feature: gene Location: 7270-8541 bp Ori: EKL02954.1 Feature: domain Description: PRK09776 Location: 7378-7684 bp Feature: domain Description: PRK09776 Location: 7378-7684 bp Feature: domain Description: PAS_9 Location: 7702-8008 bp Feature: domain Description: PAS_9 Location: 7702-8008 bp Feature: domain Description: PleD Location: 8008-8512 bp Feature: domain Description: PleD Location: 8008-851 2 bp Feature: gene Location: 8865-9140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim_Zn_Ribbon (smart00778), Toprim_3 (pfam13362), RVT-UG4, PRK09776 (putative diguanylate cyclase; Provisional), PAS_9 (pfam13426), PleD (COG3706)