myRT

myRT report for GCA_000306575.2_gls454130v02

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Seq: AKWI02000006.1 Leptospira santarosai str. 200403458 ctg7180000007612, whole genome shotgun sequence (307640 bp)
Overview 1 RT 1: 280440-285363 bp Neighborhood of RT #1 [280440, 285410] Patatin YjjU COG3547 RVT-GII GIIM DEDD_Tnp_IS110 Feature: gene Location: 280440-281444 bp Ori: EMO72525.1 Feature: domain Description: Patatin Location: 280551-281187 bp Feature: domain Description: Patatin Location: 280551 -281 1 87 bp Feature: domain Description: YjjU Location: 281259-281406 bp Feature: domain Description: YjjU Location: 281 259-281 406 bp Feature: gene Location: 282027-282947 bp Ori: EMO72727.1 Feature: domain Description: COG3547 Location: 282069-282828 bp Feature: domain Description: COG3547 Location: 282069-282828 bp Feature: gene Location: 283468-284427 bp Ori: EMO72535.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283801-284416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283801 -28441 6 bp Feature: gene Location: 284548-284814 bp Ori: EMO72625.1 Feature: domain Description: GIIM Note: maturase Location: 284554-284734 bp Feature: domain Description: GIIM Note: maturase Location: 284554-284734 bp Feature: gene Location: 285144-285410 bp Ori: EMO72656.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 285216-285363 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 28521 6-285363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Patatin (pfam01734), YjjU (COG4667), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548)

Seq: AKWI02000001.1 Leptospira santarosai str. 200403458 ctg7180000007628, whole genome shotgun sequence (268340 bp)
Overview 1 RT 1: 233264-240927 bp Neighborhood of RT #1 [233264, 240927] DUF932 RVT-UG28b Feature: gene Location: 233264-234043 bp Ori: EMO73341.1 Feature: domain Description: DUF932 Location: 233333-233972 bp Feature: domain Description: DUF932 Location: 2 33333-2 33972 bp Feature: gene Location: 234047-235660 bp Feature: gene Location: 236354-238102 bp Ori: EMO73556.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 236777-237494 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 2 36777-2 37494 bp Feature: gene Location: 238170-239264 bp Feature: gene Location: 239917-240927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-UG28b