myRT

myRT report for GCA_000307495.1_Para_merd_CL09T00C40_V1

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Seq: JH976532.1 Parabacteroides merdae CL09T00C40 genomic scaffold supercont1.9, whole genome shotgun sequence (53605 bp)
Overview 1 RT 1: 37634-43209 bp Neighborhood of RT #1 [37634, 43209] DUF4838 F5_F8_type_C INTN1_C_like RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 37634-38929 bp Feature: domain Description: DUF4838 Location: 37637-38078 bp Feature: domain Description: DUF4838 Location: 37637-38078 bp Feature: domain Description: F5_F8_type_C Location: 38522-38888 bp Feature: domain Description: F5_F8_type_C Location: 38522-38888 bp Feature: gene Location: 39093-39416 bp Feature: domain Description: INTN1_C_like Location: 39192-39369 bp Feature: domain Description: INTN1 _C_like Location: 391 92-39369 bp Feature: gene Location: 39433-41250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39697-40519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39697-4051 9 bp Feature: domain Description: Intron_maturas2 Location: 40594-40900 bp Feature: domain Description: Intron_maturas2 Location: 40594-40900 bp Feature: gene Location: 41792-42826 bp Feature: domain Description: Arm-DNA-bind_5 Location: 41831-42059 bp Feature: domain Description: Arm-DNA-bind_5 Location: 41 831 -42059 bp Feature: domain Description: Phage_int_SAM_5 Location: 42122-42428 bp Feature: domain Description: Phage_int_SAM_5 Location: 421 22-42428 bp Feature: domain Description: INTN1_C_like Location: 42476-42803 bp Feature: domain Description: INTN1 _C_like Location: 42476-42803 bp Feature: gene Location: 42880-43209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4838 (pfam16126), F5_F8_type_C (pfam00754), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102)

Seq: JH976527.1 Parabacteroides merdae CL09T00C40 genomic scaffold supercont1.4, whole genome shotgun sequence (623804 bp)
Overview 1 RT 1: 292858-296881 bp Neighborhood of RT #1 [292858, 296881] RVT-DGRs Feature: gene Location: 292858-293238 bp Feature: gene Location: 293235-293663 bp Feature: gene Location: 293626-294813 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 293956-294655 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 93956-2 94655 bp Feature: gene Location: 295146-296507 bp Feature: gene Location: 296681-296881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs