myRT

myRT report for GCA_000308235.2_ASM30823v2

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Seq: CM001772.1 Acinetobacter venetianus VE-C3 chromosome, whole genome shotgun sequence (3358062 bp)
Overview 1 RT 1: 899910-906420 bp 2 RT 2: 1129022-1134229 bp 3 RT 3: 1808691-1812441 bp Neighborhood of RT #1 [899910, 906420] InsE RVT-UG3 RVT-UG8 DUF3387 Neighborhood of RT #2 [1129022, 1134249] DUF1910 DUF1911 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Neighborhood of RT #3 [1808691, 1812446] RVT_N RVT-GII GIIM DDE_Tnp_IS66_C AcAcCoA_reduct Feature: gene Location: 899910-900215 bp Feature: domain Description: InsE Location: 899913-900087 bp Feature: domain Description: InsE Location: 89991 3-900087 bp Feature: gene Location: 900415-900621 bp Feature: gene Location: 901032-902390 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 901497-901974 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 901 497-901 974 bp Feature: gene Location: 902383-904422 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 903001-903448 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 903001 -903448 bp Feature: gene Location: 905487-905918 bp Feature: domain Description: DUF3387 Location: 905493-905883 bp Feature: domain Description: DUF3387 Location: 905493-905883 bp Feature: gene Location: 906073-906420 bp Feature: gene Location: 1129022-1130008 bp Feature: domain Description: DUF1910 Location: 1129079-1129460 bp Feature: domain Description: DUF1 91 0 Location: 1 1 29079-1 1 29460 bp Feature: domain Description: DUF1911 Location: 1129505-1129811 bp Feature: domain Description: DUF1 91 1 Location: 1 1 29505-1 1 2981 1 bp Feature: gene Location: 1130280-1130498 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1130364-1130475 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 30364-1 1 30475 bp Feature: gene Location: 1130612-1132288 bp Feature: domain Description: RVT_N Location: 1130672-1130915 bp Feature: domain Description: RVT_N Location: 1 1 30672-1 1 3091 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130960-1131596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 30960-1 1 31 596 bp Feature: domain Description: GIIM Note: maturase Location: 1131650-1131881 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 31 650-1 1 31 881 bp Feature: gene Location: 1132316-1132495 bp Feature: gene Location: 1132828-1134249 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1133020-1133245 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 1 33020-1 1 33245 bp Feature: domain Description: zf-IS66 Location: 1133269-1133395 bp Feature: domain Description: zf-IS66 Location: 1 1 33269-1 1 33395 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1133437-1134229 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 33437-1 1 34229 bp Feature: gene Location: 1808691-1808837 bp Feature: gene Location: 1809047-1809214 bp Feature: gene Location: 1809261-1810937 bp Feature: domain Description: RVT_N Location: 1809321-1809564 bp Feature: domain Description: RVT_N Location: 1 809321 -1 809564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1809609-1810245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 809609-1 81 0245 bp Feature: domain Description: GIIM Note: maturase Location: 1810299-1810530 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 0299-1 81 0530 bp Feature: gene Location: 1811051-1811269 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1811135-1811246 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 81 1 1 35-1 81 1 246 bp Feature: gene Location: 1811700-1812446 bp Feature: domain Description: AcAcCoA_reduct Location: 1811715-1812441 bp Feature: domain Description: AcAcCoA_reduct Location: 1 81 1 71 5-1 81 2441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-UG3, RVT-UG8, DUF3387 (pfam11867), DUF1910 (pfam08928), DUF1911 (pfam08929), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)
LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), AcAcCoA_reduct (TIGR01829)

Seq: ALIG01000010.1 Acinetobacter venetianus VE-C3 plasmid pAV3, complete sequence, whole genome shotgun sequence (186446 bp)
Overview 1 RT 1: 106146-110109 bp Neighborhood of RT #1 [106146, 110109] Tra8 RVT-UG2 Feature: gene Location: 106146-106475 bp Feature: gene Location: 106767-107159 bp Feature: domain Description: Tra8 Location: 106782-107142 bp Feature: domain Description: Tra8 Location: 106782 -107142 bp Feature: gene Location: 107345-108745 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 107582-108476 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 107582 -108476 bp Feature: gene Location: 109133-109285 bp Feature: gene Location: 109441-110109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-UG2