myRT

myRT report for GCA_000309585.1_ASM30958v1

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Seq: AFYK01000055.1 Lactobacillus casei 21/1 ctg55_00005, whole genome shotgun sequence (12665 bp)
Overview 1 RT 1: 3068-8045 bp Neighborhood of RT #1 [3068, 8045] Rve MobC RVT-UG2 DDE_Tnp_1 Feature: gene Location: 3068-3751 bp Ori: EKP97638.1 Feature: domain Description: Rve Location: 3071-3722 bp Feature: domain Description: Rve Location: 3071 -3722 bp Feature: gene Location: 4538-4927 bp Ori: EKP97639.1 Feature: domain Description: MobC Location: 4739-4859 bp Feature: domain Description: MobC Location: 4739-4859 bp Feature: gene Location: 4967-6526 bp Ori: EKP97640.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5174-6044 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 51 74-6044 bp Feature: gene Location: 7332-7802 bp Ori: EKP97641.1 Feature: domain Description: DDE_Tnp_1 Location: 7335-7770 bp Feature: domain Description: DDE_Tnp_1 Location: 7335-7770 bp Feature: gene Location: 7866-8045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), MobC (pfam05713), RVT-UG2, DDE_Tnp_1 (pfam01609)

Seq: AFYK01000029.1 Lactobacillus casei 21/1 ctg29_00106, whole genome shotgun sequence (84732 bp)
Overview 1 RT 1: 72524-77052 bp Neighborhood of RT #1 [72524, 77054] RVT-UG2 guaA Feature: gene Location: 72524-72679 bp Feature: gene Location: 72824-73048 bp Feature: gene Location: 73486-74901 bp Ori: EKQ02361.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 73738-74560 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 73738-74560 bp Feature: gene Location: 75047-75199 bp Feature: gene Location: 75501-77054 bp Ori: EKQ02363.1 Feature: domain Description: guaA Location: 75531-77052 bp Feature: domain Description: guaA Location: 75531-77052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, guaA (PRK00074)