myRT

myRT report for GCA_000310165.2_ASM31016v2

Download annotations/find similar RTs

Seq: AMXC01000004.1 Thauera sp. 63 Cont4, whole genome shotgun sequence (228967 bp)
Overview 1 RT 1: 90737-95324 bp Neighborhood of RT #1 [90737, 95419] PRK01917 RVT-GII GIIM Tra5 HTH_Tnp_1 HTH_Tnp_1 Feature: gene Location: 90737-90883 bp Feature: gene Location: 90979-91422 bp Feature: domain Description: PRK01917 Location: 91003-91372 bp Feature: domain Description: PRK01 91 7 Location: 91 003-91 372 bp Feature: gene Location: 91915-93282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92248-92860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92248-92860 bp Feature: domain Description: GIIM Note: maturase Location: 92920-93124 bp Feature: domain Description: GIIM Note: maturase Location: 92920-931 24 bp Feature: gene Location: 93472-93582 bp Feature: domain Description: Tra5 Location: 93481-93559 bp Feature: domain Description: Tra5 Location: 93481 -93559 bp Feature: gene Location: 95006-95419 bp Feature: domain Description: HTH_Tnp_1 Location: 95009-95078 bp Feature: domain Description: HTH_Tnp_1 Location: 95009-95078 bp Feature: domain Description: HTH_Tnp_1 Location: 95093-95324 bp Feature: domain Description: HTH_Tnp_1 Location: 95093-95324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01917 (cation-binding hemerythrin HHE family protein; Provisional), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), HTH_Tnp_1 (pfam01527)

Seq: AMXC01000006.1 Thauera sp. 63 Cont6, whole genome shotgun sequence (190669 bp)
Overview 1 RT 1: 169552-177535 bp Neighborhood of RT #1 [169552, 177666] DUF1329 DUF1302 RVT-GII GIIM COG1033 Feature: gene Location: 169552-170865 bp Feature: domain Description: DUF1329 Location: 169756-170851 bp Feature: domain Description: DUF132 9 Location: 169756-170851 bp Feature: gene Location: 170894-172507 bp Feature: domain Description: DUF1302 Location: 170984-172505 bp Feature: domain Description: DUF1302 Location: 170984-172 505 bp Feature: gene Location: 173438-174187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173447-173879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173447-173879 bp Feature: gene Location: 173944-174327 bp Feature: domain Description: GIIM Note: maturase Location: 173962-174181 bp Feature: domain Description: GIIM Note: maturase Location: 173962 -174181 bp Feature: gene Location: 175216-177666 bp Feature: domain Description: COG1033 Location: 175270-177535 bp Feature: domain Description: COG1033 Location: 1752 70-177535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1329 (pfam07044), DUF1302 (pfam06980), RVT-GII, GIIM (pfam08388), COG1033 (Predicted exporter protein, RND superfamily )

Seq: AMXC01000001.1 Thauera sp. 63 Cont1, whole genome shotgun sequence (431762 bp)
Overview 1 RT 1: 152368-157912 bp Neighborhood of RT #1 [152368, 157917] BolA prsA RVT-GII GIIM PTZ00456 COG3235 Feature: gene Location: 152368-152655 bp Feature: domain Description: BolA Location: 152389-152641 bp Feature: domain Description: BolA Location: 1523 89-152641 bp Feature: gene Location: 152666-153448 bp Feature: domain Description: prsA Location: 152942-153413 bp Feature: domain Description: prsA Location: 152942-153 413 bp Feature: gene Location: 153571-154653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153619-154231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153 619-15423 1 bp Feature: domain Description: GIIM Note: maturase Location: 154291-154507 bp Feature: domain Description: GIIM Note: maturase Location: 154291-154507 bp Feature: gene Location: 155424-157220 bp Feature: domain Description: PTZ00456 Location: 155433-157164 bp Feature: domain Description: PTZ00456 Location: 15543 3 -157164 bp Feature: gene Location: 157252-157917 bp Feature: domain Description: COG3235 Location: 157288-157912 bp Feature: domain Description: COG3 23 5 Location: 157288-157912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BolA (pfam01722), prsA (PRK04405), RVT-GII, GIIM (pfam08388), PTZ00456 (acyl-CoA dehydrogenase; Provisional), COG3235 (Uncharacterized membrane protein )