myRT

myRT report for GCA_000310565.1_ASM31056v1

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Seq: ANCL01000039.1 Streptococcus agalactiae FSL S3-026 ctg120003233286, whole genome shotgun sequence (22474 bp)
Overview 1 RT 1: 27-2693 bp Neighborhood of RT #1 [27, 2693] InsE RVT-GII GIIM Feature: gene Location: 27-302 bp Feature: domain Description: InsE Location: 39-291 bp Feature: domain Description: InsE Location: 39-291 bp Feature: gene Location: 322-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-703 bp Feature: domain Description: GIIM Note: maturase Location: 760-988 bp Feature: domain Description: GIIM Note: maturase Location: 760-988 bp Feature: gene Location: 1514-2323 bp Feature: gene Location: 2394-2693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388)

Seq: ANCL01000092.1 Streptococcus agalactiae FSL S3-026 ctg120003233339, whole genome shotgun sequence (4243 bp)
Overview 1 RT 1: 2-3592 bp Neighborhood of RT #1 [2, 3592] RVT_N RVT-GII GIIM TraC-F-type TraC-F-type Feature: gene Location: 2-1354 bp Feature: RT Description: RVT_N Location: 98-338 bp Feature: RT Description: RVT_N Location: 98-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1046 bp Feature: domain Description: GIIM Note: maturase Location: 1115-1334 bp Feature: domain Description: GIIM Note: maturase Location: 1115-1334 bp Feature: gene Location: 1864-3411 bp Feature: domain Description: TraC-F-type Location: 2371-2542 bp Feature: domain Description: TraC-F-type Location: 2 371-2 542 bp Feature: domain Description: TraC-F-type Location: 2701-3379 bp Feature: domain Description: TraC-F-type Location: 2 701-3379 bp Feature: gene Location: 3455-3592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: ANCL01000094.1 Streptococcus agalactiae FSL S3-026 ctg120003233341, whole genome shotgun sequence (22633 bp)
Overview 1 RT 1: 120-3295 bp Neighborhood of RT #1 [120, 3333] RVT_N RVT-GII GIIM CelC DeoR Feature: gene Location: 120-1826 bp Feature: RT Description: RVT_N Location: 225-465 bp Feature: RT Description: RVT_N Location: 225-465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513-1173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513 -1173 bp Feature: domain Description: GIIM Note: maturase Location: 1242-1461 bp Feature: domain Description: GIIM Note: maturase Location: 1242-1461 bp Feature: gene Location: 1898-2140 bp Feature: domain Description: CelC Location: 1916-2126 bp Feature: domain Description: CelC Location: 1916-2126 bp Feature: gene Location: 2344-3333 bp Feature: domain Description: DeoR Location: 2353-3295 bp Feature: domain Description: DeoR Location: 23 53 -3 295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), CelC (COG1447), DeoR (COG2390)

Seq: ANCL01000098.1 Streptococcus agalactiae FSL S3-026 ctg120003233345, whole genome shotgun sequence (19102 bp)
Overview 1 RT 1: 11567-19094 bp Neighborhood of RT #1 [11567, 19099] N6_Mtase COG4646 KOG0390 RVT_N RVT-GII PHA02517 Feature: gene Location: 11567-17575 bp Feature: domain Description: N6_Mtase Location: 13592-14183 bp Feature: domain Description: N6_Mtase Location: 13592-14 183 bp Feature: domain Description: COG4646 Location: 14774-17078 bp Feature: domain Description: COG4 64 6 Location: 14 774 -17078 bp Feature: domain Description: KOG0390 Location: 17348-17546 bp Feature: domain Description: KOG0390 Location: 1734 8-1754 6 bp Feature: gene Location: 17750-17935 bp Feature: gene Location: 18135-18815 bp Feature: RT Description: RVT_N Location: 18180-18423 bp Feature: RT Description: RVT_N Location: 18180-184 23 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18468-18804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184 68-18804 bp Feature: gene Location: 18833-19099 bp Feature: domain Description: PHA02517 Location: 18839-19094 bp Feature: domain Description: PHA02517 Location: 18839-19094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT_N (pfam13655), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)