myRT

myRT report for GCA_000310685.1_ASM31068v1

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Seq: ANEM01000052.1 Streptococcus agalactiae MRI Z1-022 ctg120005738453, whole genome shotgun sequence (54487 bp)
Overview 1 RT 1: 43612-51054 bp Neighborhood of RT #1 [43612, 51167] TraC-F-type RVT-GII TraC-F-type PrgI Feature: gene Location: 43612-45693 bp Feature: gene Location: 45700-46026 bp Feature: domain Description: TraC-F-type Location: 45712-45841 bp Feature: domain Description: TraC-F-type Location: 4571 2-45841 bp Feature: gene Location: 46255-48138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46579-47275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46579-47275 bp Feature: gene Location: 48848-50680 bp Feature: domain Description: TraC-F-type Location: 49517-50639 bp Feature: domain Description: TraC-F-type Location: 4951 7-50639 bp Feature: gene Location: 50769-51167 bp Feature: domain Description: PrgI Location: 50787-51054 bp Feature: domain Description: PrgI Location: 50787-51 054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, PrgI (pfam12666)

Seq: ANEM01000024.1 Streptococcus agalactiae MRI Z1-022 ctg120005738425, whole genome shotgun sequence (91751 bp)
Overview 1 RT 1: 78252-87380 bp Neighborhood of RT #1 [78252, 87409] RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 Feature: gene Location: 78252-79061 bp Feature: gene Location: 79195-79536 bp Feature: gene Location: 79642-80853 bp Feature: RT Description: RVT_N Location: 79687-79930 bp Feature: RT Description: RVT_N Location: 79687-79930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79975-80623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79975-8062 3 bp Feature: domain Description: GIIM Note: maturase Location: 80680-80851 bp Feature: domain Description: GIIM Note: maturase Location: 80680-80851 bp Feature: gene Location: 80850-80960 bp Feature: gene Location: 81413-87409 bp Feature: domain Description: N6_Mtase Location: 83423-84014 bp Feature: domain Description: N6_Mtase Location: 8342 3-84014 bp Feature: domain Description: COG4646 Location: 84605-86912 bp Feature: domain Description: COG4646 Location: 84605-86912 bp Feature: domain Description: KOG0390 Location: 87182-87380 bp Feature: domain Description: KOG0390 Location: 87182 -87380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family )