myRT

myRT report for GCA_000312285.1_ASM31228v1

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Seq: CAIQ01000039.1 Microcystis aeruginosa 9701 WGS project CAIQ01000000 data, contig AAI_K_2204_133, whole genome shotgun sequence (8413 bp)
Overview 1 RT 1: 3012-8288 bp Neighborhood of RT #1 [3012, 8317] HAS-barrel NdhS RVT_N RVT-GII GIIM McrA WD40 DnaJ Feature: gene Location: 3012-3686 bp Ori: CCI35109.1 Feature: domain Description: HAS-barrel Location: 3066-3324 bp Feature: domain Description: HAS-barrel Location: 3066-3324 bp Feature: gene Location: 3689-3883 bp Ori: CCI35110.1 Feature: domain Description: NdhS Location: 3695-3848 bp Feature: domain Description: NdhS Location: 3695-3848 bp Feature: gene Location: 3984-5831 bp Ori: CCI35111.1 Feature: domain Description: RVT_N Location: 4050-4293 bp Feature: domain Description: RVT_N Location: 4050-4293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4338-5007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4338-5007 bp Feature: domain Description: GIIM Note: maturase Location: 5112-5328 bp Feature: domain Description: GIIM Note: maturase Location: 51 1 2-5328 bp Feature: domain Description: McrA Location: 5454-5721 bp Feature: domain Description: McrA Location: 5454-5721 bp Feature: gene Location: 6200-6334 bp Feature: gene Location: 6638-8317 bp Ori: CCI35113.1 Feature: domain Description: WD40 Location: 7229-8096 bp Feature: domain Description: WD40 Location: 7229-8096 bp Feature: domain Description: DnaJ Location: 8141-8288 bp Feature: domain Description: DnaJ Location: 81 41 -8288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAS-barrel (pfam09378), NdhS (pfam11623), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), WD40 (smart00320), DnaJ (smart00271)

Seq: HE974183.1 Microcystis aeruginosa PCC 9701 genomic scaffold, AAI_K_2204_scaffold15, whole genome shotgun sequence (1010642 bp)
Overview 1 RT 1: 926831-929216 bp Neighborhood of RT #1 [926831, 929221] RVT-GII COG1808 DUF3146 Feature: gene Location: 926831-927025 bp Feature: gene Location: 927123-927248 bp Feature: gene Location: 927310-927471 bp Ori: CCI36903.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 927316-927421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 7316-92 742 1 bp Feature: gene Location: 927882-928871 bp Ori: CCI36904.1 Feature: domain Description: COG1808 Location: 927948-928857 bp Feature: domain Description: COG1808 Location: 92 7948-92 8857 bp Feature: gene Location: 928958-929221 bp Ori: CCI36905.1 Feature: domain Description: DUF3146 Location: 928979-929216 bp Feature: domain Description: DUF3146 Location: 92 8979-92 92 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG1808 (Uncharacterized membrane protein ), DUF3146 (pfam11344)

Seq: CAIQ01000501.1 Microcystis aeruginosa 9701 WGS project CAIQ01000000 data, contig AAI_K_2204_55, whole genome shotgun sequence (16019 bp)
Overview 1 RT 1: 4945-11503 bp Neighborhood of RT #1 [4945, 11503] thiolase Nterm_to_SelD RVT-UG19 NERD DEXXQc_Helz-like Feature: gene Location: 4945-6135 bp Ori: CCI38663.1 Gene: atoB Feature: domain Description: thiolase Location: 4960-6130 bp Feature: domain Description: thiolase Location: 4960-613 0 bp Feature: gene Location: 6355-7488 bp Ori: CCI38664.1 Feature: domain Description: Nterm_to_SelD Location: 6376-7477 bp Feature: domain Description: Nterm_to_SelD Location: 63 76-7477 bp Feature: gene Location: 7773-9452 bp Ori: CCI38665.1 Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 8166-8667 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 8166-8667 bp Feature: gene Location: 9494-11107 bp Ori: CCI38666.1 Feature: domain Description: NERD Location: 9542-9827 bp Feature: domain Description: NERD Location: 9542-9827 bp Feature: domain Description: DEXXQc_Helz-like Location: 10154-10373 bp Feature: domain Description: DEXXQc_Helz-like Location: 10154-103 73 bp Feature: gene Location: 11258-11503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT thiolase (PRK06158), Nterm_to_SelD (TIGR03169), RVT-UG19, NERD (pfam08378), DEXXQc_Helz-like (cd18038)

Seq: HE974191.1 Microcystis aeruginosa PCC 9701 genomic scaffold, AAI_K_2204_scaffold23, whole genome shotgun sequence (766571 bp)
Overview 1 RT 1: 691287-695342 bp Neighborhood of RT #1 [691287, 695389] RVT-CRISPR-like rps4 COG1259 Feature: gene Location: 691287-691913 bp Feature: gene Location: 691946-692068 bp Feature: gene Location: 692564-693292 bp Ori: CCI37838.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 692771-693158 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 692771-693158 bp Feature: gene Location: 693921-694529 bp Ori: CCI37839.1 Gene: rpsD Feature: domain Description: rps4 Location: 693924-694524 bp Feature: domain Description: rps4 Location: 693924 -694 524 bp Feature: gene Location: 694889-695389 bp Ori: CCI37840.1 Feature: domain Description: COG1259 Location: 694892-695342 bp Feature: domain Description: COG1259 Location: 694 892-69534 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, rps4 (CHL00113), COG1259 (Bifunctional DNase/RNase )