myRT

myRT report for GCA_000312305.1_ASM31230v1

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Seq: HE999448.1 Candidatus Prevotella conceptionensis 9403948 genomic scaffold, scaffold00006, whole genome shotgun sequence (330108 bp)
Overview 1 RT 1: 59226-63811 bp Neighborhood of RT #1 [59226, 63819] RVT-Retrons COG2865 Feature: gene Location: 59226-60128 bp Feature: gene Location: 60125-60442 bp Feature: gene Location: 60635-62041 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60860-61415 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60860-61 41 5 bp Feature: gene Location: 63477-63656 bp Feature: gene Location: 63667-63819 bp Feature: domain Description: COG2865 Location: 63670-63811 bp Feature: domain Description: COG2865 Location: 63670-6381 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: HE999452.1 Candidatus Prevotella conceptionensis 9403948 genomic scaffold, scaffold00010, whole genome shotgun sequence (141522 bp)
Overview 1 RT 1: 45093-49220 bp Neighborhood of RT #1 [45093, 49234] ruvA RVT-Retrons NERD zf-C4_Topoisom Feature: gene Location: 45093-45710 bp Feature: domain Description: ruvA Location: 45096-45705 bp Feature: domain Description: ruvA Location: 45096-45705 bp Feature: gene Location: 45762-45905 bp Feature: gene Location: 46142-47380 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46346-46925 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46346-4692 5 bp Feature: gene Location: 47657-47968 bp Feature: gene Location: 48428-49234 bp Feature: domain Description: NERD Location: 48515-48893 bp Feature: domain Description: NERD Location: 48515-48893 bp Feature: domain Description: zf-C4_Topoisom Location: 49121-49220 bp Feature: domain Description: zf-C4_Topoisom Location: 4912 1-492 2 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ruvA (TIGR00084), RVT-Retrons, NERD (pfam08378), zf-C4_Topoisom (pfam01396)