myRT

myRT report for GCA_000315035.1_ASM31503v1

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Seq: BAEQ01000046.1 Glaciecola pallidula DSM 14239 = ACAM 615 DNA, contig: CTG046, whole genome shotgun sequence (11482 bp)
Overview 1 RT 1: 8941-11276 bp Neighborhood of RT #1 [8941, 11356] PEP-CTERM RVT-UG4 Feature: gene Location: 8941-9063 bp Feature: gene Location: 10228-10821 bp Ori: GAC29556.1 Feature: domain Description: PEP-CTERM Location: 10741-10804 bp Feature: domain Description: PEP-CTERM Location: 1 0741 -1 0804 bp Feature: gene Location: 10949-11356 bp Ori: GAC29557.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 10955-11276 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 0955-1 1 276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PEP-CTERM, RVT-UG4

Seq: BAEQ01000054.1 Glaciecola pallidula DSM 14239 = ACAM 615 DNA, contig: CTG054, whole genome shotgun sequence (161887 bp)
Overview 1 RT 1: 143391-151162 bp Neighborhood of RT #1 [143391, 151164] COG0610 RVT-Retrons Arm-DNA-bind_3 INT_P4_C TIGR00255 Feature: gene Location: 143391-143537 bp Feature: gene Location: 143870-146680 bp Ori: GAC30305.1 Gene: hsdR Feature: domain Description: COG0610 Location: 143873-146582 bp Feature: domain Description: COG0610 Location: 143873-146582 bp Feature: gene Location: 146761-148509 bp Ori: GAC30306.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 146905-147526 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 146905-14752 6 bp Feature: gene Location: 148844-150133 bp Ori: GAC30307.1 Feature: domain Description: Arm-DNA-bind_3 Location: 148904-149165 bp Feature: domain Description: Arm-DNA-bind_3 Location: 148904-149165 bp Feature: domain Description: INT_P4_C Location: 149549-150101 bp Feature: domain Description: INT_P4_C Location: 149549-150101 bp Feature: gene Location: 150301-151164 bp Ori: GAC30308.1 Feature: domain Description: TIGR00255 Location: 150304-151162 bp Feature: domain Description: TIGR002 55 Location: 150304-151162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), TIGR00255 (TIGR00255 family protein)

Seq: BAEQ01000024.1 Glaciecola pallidula DSM 14239 = ACAM 615 DNA, contig: CTG024, whole genome shotgun sequence (149581 bp)
Overview 1 RT 1: 1748-9686 bp Neighborhood of RT #1 [1748, 9748] RVT-UG4 xerS INT_C_like_1 Feature: gene Location: 1748-3721 bp Feature: gene Location: 3878-4033 bp Feature: gene Location: 5757-6806 bp Ori: GAC28392.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6099-6546 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6099-6546 bp Feature: gene Location: 7141-7689 bp Feature: gene Location: 7997-9748 bp Ori: GAC28394.1 Feature: domain Description: xerS Location: 8885-9113 bp Feature: domain Description: xerS Location: 8885-9113 bp Feature: domain Description: INT_C_like_1 Location: 9119-9686 bp Feature: domain Description: INT_C_like_1 Location: 9119-9686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, xerS (PRK05084), INT_C_like_1 (cd01184)