myRT

myRT report for GCA_000315115.1_RU1_contigs

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Seq: AMCG01001097.1 Candidatus Kuenenia stuttgartiensis enrichment culture clone RU1 clone RU1 RU1_contig2055, whole genome shotgun sequence (666 bp)
Overview 1 RT 1: 3-126 bp Neighborhood of RT #1 [3, 665] RVT-UG15 Feature: gene Location: 3-665 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 6-126 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 6-1 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15

Seq: AMCG01001205.1 Candidatus Kuenenia stuttgartiensis enrichment culture clone RU1 clone RU1 RU1_contig2472, whole genome shotgun sequence (758 bp)
Overview 1 RT 1: 3-688 bp Neighborhood of RT #1 [3, 756] RVT-GII RVT-GII Feature: gene Location: 3-488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-459 bp Feature: gene Location: 442-756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AMCG01002103.1 Candidatus Kuenenia stuttgartiensis enrichment culture clone RU1 clone RU1 RU1_contig1628, whole genome shotgun sequence (2015 bp)
Overview 1 RT 1: 432-1734 bp Neighborhood of RT #1 [432, 1734] RVT-GII Feature: gene Location: 432-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645-1266 bp Feature: gene Location: 1429-1734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AMCG01002304.1 Candidatus Kuenenia stuttgartiensis enrichment culture clone RU1 clone RU1 RU1_contig2634, whole genome shotgun sequence (2586 bp)
Overview 1 RT 1: 1-1456 bp Neighborhood of RT #1 [1, 1456] RVT-GII GIIM RVT_N RVT-GII RVT_N Feature: gene Location: 1-540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-337 bp Feature: domain Description: GIIM Note: maturase Location: 394-529 bp Feature: domain Description: GIIM Note: maturase Location: 394 -529 bp Feature: gene Location: 557-691 bp Feature: gene Location: 711-968 bp Feature: domain Description: RVT_N Location: 717-804 bp Feature: domain Description: RVT_N Location: 717-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855-963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855-963 bp Feature: gene Location: 1024-1155 bp Feature: domain Description: RVT_N Location: 1078-1150 bp Feature: domain Description: RVT_N Location: 1078-1150 bp Feature: gene Location: 1238-1456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: AMCG01002373.1 Candidatus Kuenenia stuttgartiensis enrichment culture clone RU1 clone RU1 RU1_contig2174, whole genome shotgun sequence (2825 bp)
Overview 1 RT 1: 3-2616 bp Neighborhood of RT #1 [3, 2651] Cas_Cas02710 Cas_csx3 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 3-206 bp Feature: domain Description: Cas_Cas02710 Location: 24-135 bp Feature: domain Description: Cas_Cas02710 Location: 24-135 bp Feature: gene Location: 281-442 bp Feature: domain Description: Cas_csx3 Location: 308-434 bp Feature: domain Description: Cas_csx3 Location: 308-434 bp Feature: gene Location: 445-1389 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 646-1243 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 646-1243 bp Feature: gene Location: 1371-2372 bp Feature: domain Description: Cas1_I-II-III Location: 1380-2334 bp Feature: domain Description: Cas1_I-II-III Location: 1380-2334 bp Feature: gene Location: 2376-2651 bp Feature: domain Description: Cas2_I_II_III Location: 2385-2616 bp Feature: domain Description: Cas2_I_II_III Location: 2385 -2616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas02710 (pfam09670), Cas_csx3 (pfam09620), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)