myRT

myRT report for GCA_000315235.1_ASM31523v1

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Seq: BALG01000038.1 Paenibacillus popilliae ATCC 14706 DNA, contig: contig038, whole genome shotgun sequence (47676 bp)
Overview 1 RT 1: 38445-43197 bp Neighborhood of RT #1 [38445, 43220] YitT RVT-GII PRK05431 PRK13525 Feature: gene Location: 38445-39455 bp Ori: GAC41545.1 Feature: domain Description: YitT Location: 38622-39444 bp Feature: domain Description: YitT Location: 38622-39444 bp Feature: gene Location: 39981-40352 bp Feature: gene Location: 40366-40602 bp Ori: GAC41547.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40372-40561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40372-40561 bp Feature: gene Location: 41197-42474 bp Ori: GAC41548.1 Feature: domain Description: PRK05431 Location: 41203-42466 bp Feature: domain Description: PRK05431 Location: 41 203-42466 bp Feature: gene Location: 42627-43220 bp Ori: GAC41549.1 Feature: domain Description: PRK13525 Location: 42630-43197 bp Feature: domain Description: PRK1 3525 Location: 42630-431 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YitT (COG1284), RVT-GII, PRK05431 (seryl-tRNA synthetase; Provisional), PRK13525 (pyridoxal 5'-phosphate synthase glutaminase subunit PdxT)

Seq: BALG01000002.1 Paenibacillus popilliae ATCC 14706 DNA, contig: contig002, whole genome shotgun sequence (52755 bp)
Overview 1 RT 1: 35029-37105 bp Neighborhood of RT #1 [35029, 37176] group_II_RT_mat RVT-GII INT_ICEBs1_C_like INT_ICEBs1_C_like Feature: gene Location: 35029-35415 bp Ori: GAC40733.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 35197-35377 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 35197-35377 bp Feature: gene Location: 35444-35968 bp Ori: GAC40734.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35450-35858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35450-35858 bp Feature: gene Location: 36443-36796 bp Ori: GAC40735.1 Feature: domain Description: INT_ICEBs1_C_like Location: 36572-36737 bp Feature: domain Description: INT_ICEBs1_C_like Location: 36572 -36737 bp Feature: gene Location: 36793-37176 bp Ori: GAC40736.1 Feature: domain Description: INT_ICEBs1_C_like Location: 36796-37105 bp Feature: domain Description: INT_ICEBs1_C_like Location: 36796-37105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, INT_ICEBs1_C_like (cd01189)

Seq: BALG01000156.1 Paenibacillus popilliae ATCC 14706 DNA, contig: contig156, whole genome shotgun sequence (509 bp)
Overview 1 RT 1: 1-355 bp Neighborhood of RT #1 [1, 358] RVT-GII Feature: gene Location: 1-358 bp Ori: GAC42868.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286-355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286-3 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BALG01000417.1 Paenibacillus popilliae ATCC 14706 DNA, contig: contig417, whole genome shotgun sequence (8629 bp)
Overview 1 RT 1: 5407-8499 bp Neighborhood of RT #1 [5407, 8531] PBP2_TMBP_like RVT-GII Feature: gene Location: 5407-5625 bp Feature: gene Location: 5802-7163 bp Ori: GAC44299.1 Feature: domain Description: PBP2_TMBP_like Location: 6057-7089 bp Feature: domain Description: PBP2_TMBP_like Location: 6057-7089 bp Feature: gene Location: 7830-8531 bp Ori: GAC44300.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8085-8499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8085-84 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_TMBP_like (cd13585), RVT-GII

Seq: BALG01000089.1 Paenibacillus popilliae ATCC 14706 DNA, contig: contig089, whole genome shotgun sequence (3636 bp)
Overview 1 RT 1: 574-3154 bp Neighborhood of RT #1 [574, 3348] FGE-sulfatase Avd_like RVT-DGRs Feature: gene Location: 574-1539 bp Ori: GAC42343.1 Feature: domain Description: FGE-sulfatase Location: 796-1156 bp Feature: domain Description: FGE-sulfatase Location: 796-115 6 bp Feature: gene Location: 1616-1951 bp Ori: GAC42344.1 Feature: domain Description: Avd_like Location: 1634-1940 bp Feature: domain Description: Avd_like Location: 1634-1940 bp Feature: gene Location: 2242-3348 bp Ori: GAC42345.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2452-3154 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 245 2-315 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs

Seq: BALG01000161.1 Paenibacillus popilliae ATCC 14706 DNA, contig: contig161, whole genome shotgun sequence (55573 bp)
Overview 1 RT 1: 15586-26991 bp Neighborhood of RT #1 [15586, 27023] sbcd SbcD_C addA_Gpos addA_Gpos addA_Gpos RVT-GII Intron_maturas2 addA_Gpos addB_Gpos Feature: gene Location: 15586-16782 bp Ori: GAC42973.1 Feature: domain Description: sbcd Location: 15589-16354 bp Feature: domain Description: sbcd Location: 15589-16 354 bp Feature: domain Description: SbcD_C Location: 16426-16696 bp Feature: domain Description: SbcD_C Location: 16 426 -16 6 96 bp Feature: gene Location: 17006-19819 bp Ori: GAC42974.1 Feature: domain Description: addA_Gpos Location: 17009-17228 bp Feature: domain Description: addA_Gpos Location: 17009-17228 bp Feature: domain Description: addA_Gpos Location: 17321-19439 bp Feature: domain Description: addA_Gpos Location: 17321-19439 bp Feature: domain Description: addA_Gpos Location: 19517-19808 bp Feature: domain Description: addA_Gpos Location: 19517-19808 bp Feature: gene Location: 20040-21521 bp Ori: GAC42975.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20307-20988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20307-20988 bp Feature: domain Description: Intron_maturas2 Location: 21144-21363 bp Feature: domain Description: Intron_maturas2 Location: 21144-2136 3 bp Feature: gene Location: 22106-23602 bp Ori: GAC42976.1 Feature: domain Description: addA_Gpos Location: 22289-23594 bp Feature: domain Description: addA_Gpos Location: 22289-23594 bp Feature: gene Location: 23574-27023 bp Ori: GAC42977.1 Feature: domain Description: addB_Gpos Location: 23577-26991 bp Feature: domain Description: addB_Gpos Location: 23577-26 991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sbcd (TIGR00619), SbcD_C (pfam12320), addA_Gpos (TIGR02785), RVT-GII, Intron_maturas2 (pfam01348), addB_Gpos (TIGR02773)