myRT

myRT report for GCA_000316265.2_MTE1_ImprovedAssembly

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Seq: ANGH02000133.1 Klebsiella pneumoniae JHCK1 MTE1.contig21, whole genome shotgun sequence (91306 bp)
Overview 1 RT 1: 83709-90775 bp Neighborhood of RT #1 [83709, 90777] FimC FimD RVT-UG4 PRK09692 Feature: gene Location: 83709-84437 bp Ori: EMH93384.1 Feature: domain Description: FimC Location: 83757-84420 bp Feature: domain Description: FimC Location: 83757-84420 bp Feature: gene Location: 84484-87078 bp Ori: EMH93347.1 Feature: domain Description: FimD Location: 84526-87067 bp Feature: domain Description: FimD Location: 84526-87067 bp Feature: gene Location: 87075-89156 bp Ori: EMH93318.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 87486-87930 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 87486-87930 bp Feature: gene Location: 89914-90777 bp Ori: EMH93379.1 Feature: domain Description: PRK09692 Location: 89938-90775 bp Feature: domain Description: PRK09692 Location: 89938-90775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional)

Seq: ANGH02000028.1 Klebsiella pneumoniae JHCK1 MTE1.contig124, whole genome shotgun sequence (2027 bp)
Overview 1 RT 1: 298-1390 bp Neighborhood of RT #1 [298, 1782] RVT-GII Feature: gene Location: 298-1782 bp Ori: EMH94661.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700-1390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ANGH02000032.1 Klebsiella pneumoniae JHCK1 MTE1.contig128, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 298-1390 bp Neighborhood of RT #1 [298, 1782] RVT-GII Feature: gene Location: 298-1782 bp Ori: EMH94653.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700-13 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII