myRT

myRT report for GCA_000316925.1_712i1

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Seq: ANBX01000029.1 Vibrio sp. 712i1 contig00037, whole genome shotgun sequence (1528 bp)
Overview 1 RT 1: 248-1527 bp Neighborhood of RT #1 [248, 1526] SLATT_5 RVT-UG17 Feature: gene Location: 248-856 bp Feature: domain Description: SLATT_5 Location: 254-791 bp Feature: domain Description: SLATT_5 Location: 254-791 bp Feature: gene Location: 843-1526 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1074-1527 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 074-1 527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: ANBX01000128.1 Vibrio sp. 712i1 contig00161, whole genome shotgun sequence (80892 bp)
Overview 1 RT 1: 1700-5105 bp Neighborhood of RT #1 [1700, 5596] CspC RVT_N RVT-GII GIIM Casc1_N Feature: gene Location: 1700-1909 bp Feature: domain Description: CspC Location: 1721-1904 bp Feature: domain Description: CspC Location: 172 1-1904 bp Feature: gene Location: 2130-2321 bp Feature: gene Location: 2417-3889 bp Feature: domain Description: RVT_N Location: 2465-2708 bp Feature: domain Description: RVT_N Location: 2 465-2 708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2753-3380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 753-3380 bp Feature: domain Description: GIIM Note: maturase Location: 3440-3665 bp Feature: domain Description: GIIM Note: maturase Location: 3440-3665 bp Feature: gene Location: 4529-4675 bp Feature: gene Location: 4697-5596 bp Feature: domain Description: Casc1_N Location: 4733-5105 bp Feature: domain Description: Casc1_N Location: 4733-5105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Casc1_N (pfam15927)