myRT

myRT report for GCA_000318405.1_ASM31840v1

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Seq: KB291762.1 Brevundimonas diminuta 470-4 genomic scaffold Scfld388, whole genome shotgun sequence (92471 bp)
Overview 1 RT 1: 447-1350 bp 2 RT 2: 86772-3927 bp 3 RT 3: 86216-86576 bp 4 RT 4: 89088-90434 bp Neighborhood of RT #1 [447, 1616] RVT-Retrons Neighborhood of RT #2 [86772, 6059] RVT-Retrons COG3666 Neighborhood of RT #3 [86216, 86593] COG4898 Neighborhood of RT #4 [89088, 90511] ArdC DUF2958 Feature: gene Location: 447-1616 bp Ori: EKY24482.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 723-1350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 723-1 350 bp Feature: gene Location: 86772-88568 bp Ori: EKY24393.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86988-87522 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86988-87522 bp Feature: gene Location: 3453-6059 bp Ori: EKY24484.1 Feature: domain Description: COG3666 Location: 3495-3927 bp Feature: domain Description: COG3666 Location: 3495-3927 bp Feature: gene Location: 86216-86593 bp Ori: EKY24391.1 Feature: domain Description: COG4898 Location: 86240-86576 bp Feature: domain Description: COG4898 Location: 86240-86576 bp Feature: gene Location: 89088-90086 bp Ori: EKY24394.1 Feature: domain Description: ArdC Location: 89163-90054 bp Feature: domain Description: ArdC Location: 891 63-90054 bp Feature: gene Location: 90083-90511 bp Ori: EKY24395.1 Feature: domain Description: DUF2958 Location: 90092-90434 bp Feature: domain Description: DUF2958 Location: 90092-90434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3666 (Transposase ), COG4898 (Uncharacterized protein ), ArdC (COG4227), DUF2958 (pfam11171)