myRT

myRT report for GCA_000319835.1_Esch_coli_11-02318_V1

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Seq: KB021625.1 Escherichia coli O104:H4 str. 11-02318 genomic scaffold supercont1.23, whole genome shotgun sequence (63222 bp)
Overview 1 RT 1: 10259-16340 bp Neighborhood of RT #1 [10259, 16342] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 10259-12457 bp Feature: domain Description: TonB-siderophor Location: 10394-12455 bp Feature: domain Description: TonB-siderophor Location: 1 0394-1 2455 bp Feature: gene Location: 12859-13230 bp Feature: domain Description: PHA02517 Location: 12862-13228 bp Feature: domain Description: PHA0251 7 Location: 1 2862-1 3228 bp Feature: gene Location: 13422-14945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13695-14427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3695-1 4427 bp Feature: domain Description: GIIM Note: maturase Location: 14502-14700 bp Feature: domain Description: GIIM Note: maturase Location: 1 4502-1 4700 bp Feature: gene Location: 15537-16016 bp Feature: domain Description: PHA02517 Location: 15597-15951 bp Feature: domain Description: PHA0251 7 Location: 1 5597-1 5951 bp Feature: gene Location: 16016-16342 bp Feature: domain Description: InsE Location: 16019-16340 bp Feature: domain Description: InsE Location: 1 601 9-1 6340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: KB021627.1 Escherichia coli O104:H4 str. 11-02318 genomic scaffold supercont1.25, whole genome shotgun sequence (55523 bp)
Overview 1 RT 1: 31172-36301 bp Neighborhood of RT #1 [31172, 36303] InsE PHA02517 RVT-GII GIIM fecE Feature: gene Location: 31172-31474 bp Feature: domain Description: InsE Location: 31211-31460 bp Feature: domain Description: InsE Location: 312 11-31460 bp Feature: gene Location: 31716-31955 bp Feature: domain Description: PHA02517 Location: 31719-31890 bp Feature: domain Description: PHA02 517 Location: 31719-31890 bp Feature: gene Location: 32547-34070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-33552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 82 0-33552 bp Feature: domain Description: GIIM Note: maturase Location: 33627-33825 bp Feature: domain Description: GIIM Note: maturase Location: 3362 7-3382 5 bp Feature: gene Location: 34721-34978 bp Feature: gene Location: 35536-36303 bp Feature: domain Description: fecE Location: 35539-36301 bp Feature: domain Description: fecE Location: 35539-36301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fecE (PRK11231)

Seq: KB021613.1 Escherichia coli O104:H4 str. 11-02318 genomic scaffold supercont1.11, whole genome shotgun sequence (8004 bp)
Overview 1 RT 1: 4382-8004 bp Neighborhood of RT #1 [4382, 8004] PHA02517 RVT-GII GIIM Feature: gene Location: 4382-4531 bp Feature: gene Location: 5088-5474 bp Feature: domain Description: PHA02517 Location: 5091-5472 bp Feature: domain Description: PHA02517 Location: 5091-5472 bp Feature: gene Location: 5651-7174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5924-6656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5924-6656 bp Feature: domain Description: GIIM Note: maturase Location: 6731-6929 bp Feature: domain Description: GIIM Note: maturase Location: 673 1-6929 bp Feature: gene Location: 7766-8004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: KB021624.1 Escherichia coli O104:H4 str. 11-02318 genomic scaffold supercont1.22, whole genome shotgun sequence (10319 bp)
Overview 1 RT 1: 3-7414 bp Neighborhood of RT #1 [3, 7416] PHA02517 RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 3-455 bp Feature: domain Description: PHA02517 Location: 36-390 bp Feature: domain Description: PHA02517 Location: 36-390 bp Feature: gene Location: 1047-2570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1320-2052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1320-2052 bp Feature: domain Description: GIIM Note: maturase Location: 2127-2325 bp Feature: domain Description: GIIM Note: maturase Location: 2127-2325 bp Feature: gene Location: 2747-3133 bp Feature: domain Description: PHA02517 Location: 2750-3131 bp Feature: domain Description: PHA02517 Location: 2750-3131 bp Feature: gene Location: 3298-7416 bp Feature: domain Description: Peptidase_S6 Location: 3451-5623 bp Feature: domain Description: Peptidase_S6 Location: 34 51-5623 bp Feature: domain Description: autotrans_barl Location: 6187-7414 bp Feature: domain Description: autotrans_barl Location: 6187-74 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: KB021610.1 Escherichia coli O104:H4 str. 11-02318 genomic scaffold supercont1.8, whole genome shotgun sequence (329788 bp)
Overview 1 RT 1: 325815-329392 bp Neighborhood of RT #1 [325815, 329637] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 325815-326966 bp Feature: domain Description: HTH_38 Location: 325824-325938 bp Feature: domain Description: HTH_38 Location: 325 824-325 938 bp Feature: domain Description: Tra8 Location: 325974-326955 bp Feature: domain Description: Tra8 Location: 325 974-32695 5 bp Feature: gene Location: 327283-327522 bp Feature: domain Description: PHA02517 Location: 327286-327457 bp Feature: domain Description: PHA025 17 Location: 327286-32745 7 bp Feature: gene Location: 328114-329637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328387-329119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328387-329119 bp Feature: domain Description: GIIM Note: maturase Location: 329194-329392 bp Feature: domain Description: GIIM Note: maturase Location: 329194-329392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)