myRT

myRT report for GCA_000320015.1_Esch_coli_11-02033-1_V1

Download annotations/find similar RTs

Seq: AMVS01000025.1 Escherichia coli O104:H4 str. 11-02033-1 supercont1.31, whole genome shotgun sequence (357855 bp)
Overview 1 RT 1: 31172-36301 bp Neighborhood of RT #1 [31172, 36303] InsE PHA02517 RVT-GII GIIM fecE Feature: gene Location: 31172-31474 bp Feature: domain Description: InsE Location: 31211-31460 bp Feature: domain Description: InsE Location: 31 21 1 -31 460 bp Feature: gene Location: 31716-31955 bp Feature: domain Description: PHA02517 Location: 31719-31890 bp Feature: domain Description: PHA0251 7 Location: 31 71 9-31 890 bp Feature: gene Location: 32547-34070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-33552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-33552 bp Feature: domain Description: GIIM Note: maturase Location: 33627-33825 bp Feature: domain Description: GIIM Note: maturase Location: 33627-33825 bp Feature: gene Location: 34721-34978 bp Feature: gene Location: 35536-36303 bp Feature: domain Description: fecE Location: 35539-36301 bp Feature: domain Description: fecE Location: 35539-36301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fecE (PRK11231)

Seq: AMVS01000007.1 Escherichia coli O104:H4 str. 11-02033-1 supercont1.15, whole genome shotgun sequence (305402 bp)
Overview 1 RT 1: 301429-305006 bp Neighborhood of RT #1 [301429, 305251] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 301429-302580 bp Feature: domain Description: HTH_38 Location: 301438-301552 bp Feature: domain Description: HTH_38 Location: 301438-301552 bp Feature: domain Description: Tra8 Location: 301588-302569 bp Feature: domain Description: Tra8 Location: 301588-302 569 bp Feature: gene Location: 302897-303136 bp Feature: domain Description: PHA02517 Location: 302900-303071 bp Feature: domain Description: PHA02 517 Location: 302 900-303071 bp Feature: gene Location: 303728-305251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304001-304733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304001-304733 bp Feature: domain Description: GIIM Note: maturase Location: 304808-305006 bp Feature: domain Description: GIIM Note: maturase Location: 304808-305006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMVS01000020.1 Escherichia coli O104:H4 str. 11-02033-1 supercont1.27, whole genome shotgun sequence (162418 bp)
Overview 1 RT 1: 151749-159513 bp Neighborhood of RT #1 [151749, 159515] InsE PHA02517 RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 151749-152075 bp Feature: domain Description: InsE Location: 151752-152073 bp Feature: domain Description: InsE Location: 151752-152073 bp Feature: gene Location: 152075-152554 bp Feature: domain Description: PHA02517 Location: 152135-152489 bp Feature: domain Description: PHA02517 Location: 15213 5-152489 bp Feature: gene Location: 153146-154669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153419-154151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153 419-154151 bp Feature: domain Description: GIIM Note: maturase Location: 154226-154424 bp Feature: domain Description: GIIM Note: maturase Location: 154226-154424 bp Feature: gene Location: 154846-155232 bp Feature: domain Description: PHA02517 Location: 154849-155230 bp Feature: domain Description: PHA02517 Location: 154849-15523 0 bp Feature: gene Location: 155397-159515 bp Feature: domain Description: Peptidase_S6 Location: 155550-157722 bp Feature: domain Description: Peptidase_S6 Location: 155550-157722 bp Feature: domain Description: autotrans_barl Location: 158286-159513 bp Feature: domain Description: autotrans_barl Location: 158286-159513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: AMVS01000008.1 Escherichia coli O104:H4 str. 11-02033-1 supercont1.16, whole genome shotgun sequence (10540 bp)
Overview 1 RT 1: 8114-10295 bp Neighborhood of RT #1 [8114, 10540] PHA02517 RVT-GII GIIM Feature: gene Location: 8114-8263 bp Feature: gene Location: 8820-9206 bp Feature: domain Description: PHA02517 Location: 8823-9204 bp Feature: domain Description: PHA02517 Location: 8823-9204 bp Feature: gene Location: 9383-10540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9386-10022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9386-10022 bp Feature: domain Description: GIIM Note: maturase Location: 10097-10295 bp Feature: domain Description: GIIM Note: maturase Location: 10097-10295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMVS01000021.1 Escherichia coli O104:H4 str. 11-02033-1 supercont1.28, whole genome shotgun sequence (62474 bp)
Overview 1 RT 1: 9511-15592 bp Neighborhood of RT #1 [9511, 15594] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 9511-11709 bp Feature: domain Description: TonB-siderophor Location: 9646-11707 bp Feature: domain Description: TonB-siderophor Location: 9646-11707 bp Feature: gene Location: 12111-12482 bp Feature: domain Description: PHA02517 Location: 12114-12480 bp Feature: domain Description: PHA025 17 Location: 12114-12480 bp Feature: gene Location: 12674-14197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12947-13679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12947-13679 bp Feature: domain Description: GIIM Note: maturase Location: 13754-13952 bp Feature: domain Description: GIIM Note: maturase Location: 1375 4-1395 2 bp Feature: gene Location: 14789-15268 bp Feature: domain Description: PHA02517 Location: 14849-15203 bp Feature: domain Description: PHA025 17 Location: 14849-15 203 bp Feature: gene Location: 15268-15594 bp Feature: domain Description: InsE Location: 15271-15592 bp Feature: domain Description: InsE Location: 15 271-15 5 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), TonB-siderophor (TIGR01783)

Seq: AMVS01000042.1 Escherichia coli O104:H4 str. 11-02033-1 supercont1.47, whole genome shotgun sequence (2710 bp)
Overview 1 RT 1: 1-2179 bp Neighborhood of RT #1 [1, 2179] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 -544 bp Feature: domain Description: GIIM Note: maturase Location: 619-817 bp Feature: domain Description: GIIM Note: maturase Location: 6 19-817 bp Feature: gene Location: 1254-1625 bp Feature: domain Description: PHA02517 Location: 1257-1623 bp Feature: domain Description: PHA02517 Location: 1257-16 23 bp Feature: gene Location: 1829-2179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)