myRT

myRT report for GCA_000320035.1_Esch_coli_11-02092_V1

Download annotations/find similar RTs

Seq: AMVT01000034.1 Escherichia coli O104:H4 str. 11-02092 supercont1.8, whole genome shotgun sequence (17734 bp)
Overview 1 RT 1: 13761-17338 bp Neighborhood of RT #1 [13761, 17583] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 13761-14912 bp Feature: domain Description: HTH_38 Location: 13770-13884 bp Feature: domain Description: HTH_38 Location: 1 3770-1 3884 bp Feature: domain Description: Tra8 Location: 13920-14901 bp Feature: domain Description: Tra8 Location: 1 3920-1 4901 bp Feature: gene Location: 15229-15468 bp Feature: domain Description: PHA02517 Location: 15232-15403 bp Feature: domain Description: PHA0251 7 Location: 1 5232-1 5403 bp Feature: gene Location: 16060-17583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16333-17065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6333-1 7065 bp Feature: domain Description: GIIM Note: maturase Location: 17140-17338 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 40-1 7338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMVT01000009.1 Escherichia coli O104:H4 str. 11-02092 supercont1.17, whole genome shotgun sequence (12987 bp)
Overview 1 RT 1: 4440-12204 bp Neighborhood of RT #1 [4440, 12206] InsE PHA02517 RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 4440-4766 bp Feature: domain Description: InsE Location: 4443-4764 bp Feature: domain Description: InsE Location: 4443-4764 bp Feature: gene Location: 4766-5245 bp Feature: domain Description: PHA02517 Location: 4826-5180 bp Feature: domain Description: PHA02 517 Location: 482 6-5180 bp Feature: gene Location: 5837-7360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6110-6842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6110-6842 bp Feature: domain Description: GIIM Note: maturase Location: 6917-7115 bp Feature: domain Description: GIIM Note: maturase Location: 6917-7115 bp Feature: gene Location: 7537-7923 bp Feature: domain Description: PHA02517 Location: 7540-7921 bp Feature: domain Description: PHA02 517 Location: 7540-792 1 bp Feature: gene Location: 8088-12206 bp Feature: domain Description: Peptidase_S6 Location: 8241-10413 bp Feature: domain Description: Peptidase_S6 Location: 82 41-10413 bp Feature: domain Description: autotrans_barl Location: 10977-12204 bp Feature: domain Description: autotrans_barl Location: 10977-12 2 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: AMVT01000011.1 Escherichia coli O104:H4 str. 11-02092 supercont1.19, whole genome shotgun sequence (175894 bp)
Overview 1 RT 1: 10259-16340 bp Neighborhood of RT #1 [10259, 16342] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 10259-12457 bp Feature: domain Description: TonB-siderophor Location: 10394-12455 bp Feature: domain Description: TonB-siderophor Location: 103 94-12455 bp Feature: gene Location: 12859-13230 bp Feature: domain Description: PHA02517 Location: 12862-13228 bp Feature: domain Description: PHA02517 Location: 12862-13 228 bp Feature: gene Location: 13422-14945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13695-14427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 695-14427 bp Feature: domain Description: GIIM Note: maturase Location: 14502-14700 bp Feature: domain Description: GIIM Note: maturase Location: 14502-14700 bp Feature: gene Location: 15537-16016 bp Feature: domain Description: PHA02517 Location: 15597-15951 bp Feature: domain Description: PHA02517 Location: 15597-15951 bp Feature: gene Location: 16016-16342 bp Feature: domain Description: InsE Location: 16019-16340 bp Feature: domain Description: InsE Location: 16019-163 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: AMVT01000014.1 Escherichia coli O104:H4 str. 11-02092 supercont1.21, whole genome shotgun sequence (368832 bp)
Overview 1 RT 1: 31172-36301 bp Neighborhood of RT #1 [31172, 36303] InsE PHA02517 RVT-GII GIIM fecE Feature: gene Location: 31172-31474 bp Feature: domain Description: InsE Location: 31211-31460 bp Feature: domain Description: InsE Location: 31211-314 60 bp Feature: gene Location: 31716-31955 bp Feature: domain Description: PHA02517 Location: 31719-31890 bp Feature: domain Description: PHA02517 Location: 31719-31890 bp Feature: gene Location: 32547-34070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-33552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-33552 bp Feature: domain Description: GIIM Note: maturase Location: 33627-33825 bp Feature: domain Description: GIIM Note: maturase Location: 33627-33825 bp Feature: gene Location: 34721-34978 bp Feature: gene Location: 35536-36303 bp Feature: domain Description: fecE Location: 35539-36301 bp Feature: domain Description: fecE Location: 35539-36301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fecE (PRK11231)

Seq: AMVT01000035.1 Escherichia coli O104:H4 str. 11-02092 supercont1.9, whole genome shotgun sequence (747507 bp)
Overview 1 RT 1: 8265-15145 bp Neighborhood of RT #1 [8265, 15198] PHA02517 RVT-GII GIIM PHA02517 VI_ClpV1 Feature: gene Location: 8265-8414 bp Feature: gene Location: 8971-9357 bp Feature: domain Description: PHA02517 Location: 8974-9355 bp Feature: domain Description: PHA025 17 Location: 8974-935 5 bp Feature: gene Location: 9534-11057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9807-10539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9807-105 39 bp Feature: domain Description: GIIM Note: maturase Location: 10614-10812 bp Feature: domain Description: GIIM Note: maturase Location: 10614-10812 bp Feature: gene Location: 11649-12212 bp Feature: domain Description: PHA02517 Location: 11793-12147 bp Feature: domain Description: PHA025 17 Location: 11793-12147 bp Feature: gene Location: 12649-15198 bp Feature: domain Description: VI_ClpV1 Location: 12685-15145 bp Feature: domain Description: VI_ClpV1 Location: 12685 -15 145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), VI_ClpV1 (TIGR03345), RVT-GII, GIIM (pfam08388)