myRT

myRT report for GCA_000320075.1_Esch_coli_11-02093_V1

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Seq: AMVU01000038.1 Escherichia coli O104:H4 str. 11-02093 supercont1.9, whole genome shotgun sequence (329651 bp)
Overview 1 RT 1: 325985-329562 bp Neighborhood of RT #1 [325985, 329651] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 325985-327136 bp Feature: domain Description: HTH_38 Location: 325994-326108 bp Feature: domain Description: HTH_38 Location: 325994-3261 08 bp Feature: domain Description: Tra8 Location: 326144-327125 bp Feature: domain Description: Tra8 Location: 3261 44-3271 25 bp Feature: gene Location: 327453-327692 bp Feature: domain Description: PHA02517 Location: 327456-327627 bp Feature: domain Description: PHA0251 7 Location: 327456-327627 bp Feature: gene Location: 328284-329651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328557-329289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328557-329289 bp Feature: domain Description: GIIM Note: maturase Location: 329364-329562 bp Feature: domain Description: GIIM Note: maturase Location: 329364-329562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMVU01000010.1 Escherichia coli O104:H4 str. 11-02093 supercont1.18, whole genome shotgun sequence (158690 bp)
Overview 1 RT 1: 150179-157943 bp Neighborhood of RT #1 [150179, 157945] InsE PHA02517 RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 150179-150505 bp Feature: domain Description: InsE Location: 150182-150503 bp Feature: domain Description: InsE Location: 150182 -150503 bp Feature: gene Location: 150505-150984 bp Feature: domain Description: PHA02517 Location: 150565-150919 bp Feature: domain Description: PHA02 517 Location: 150565-150919 bp Feature: gene Location: 151576-153099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151849-152581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151849-152 581 bp Feature: domain Description: GIIM Note: maturase Location: 152656-152854 bp Feature: domain Description: GIIM Note: maturase Location: 152 656-152 854 bp Feature: gene Location: 153276-153662 bp Feature: domain Description: PHA02517 Location: 153279-153660 bp Feature: domain Description: PHA02 517 Location: 1532 79-153660 bp Feature: gene Location: 153827-157945 bp Feature: domain Description: Peptidase_S6 Location: 153980-156152 bp Feature: domain Description: Peptidase_S6 Location: 153980-156152 bp Feature: domain Description: autotrans_barl Location: 156716-157943 bp Feature: domain Description: autotrans_barl Location: 156716-157943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: AMVU01000002.1 Escherichia coli O104:H4 str. 11-02093 supercont1.10, whole genome shotgun sequence (747862 bp)
Overview 1 RT 1: 8318-15198 bp Neighborhood of RT #1 [8318, 15251] PHA02517 RVT-GII GIIM PHA02517 VI_ClpV1 Feature: gene Location: 8318-8467 bp Feature: gene Location: 9024-9410 bp Feature: domain Description: PHA02517 Location: 9027-9408 bp Feature: domain Description: PHA02517 Location: 9027-9408 bp Feature: gene Location: 9587-11110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9860-10592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9860-10592 bp Feature: domain Description: GIIM Note: maturase Location: 10667-10865 bp Feature: domain Description: GIIM Note: maturase Location: 10667-10865 bp Feature: gene Location: 11702-12265 bp Feature: domain Description: PHA02517 Location: 11846-12200 bp Feature: domain Description: PHA02517 Location: 11846-12200 bp Feature: gene Location: 12702-15251 bp Feature: domain Description: VI_ClpV1 Location: 12738-15198 bp Feature: domain Description: VI_ClpV1 Location: 1273 8-15198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), VI_ClpV1 (TIGR03345), RVT-GII, GIIM (pfam08388)

Seq: AMVU01000015.1 Escherichia coli O104:H4 str. 11-02093 supercont1.22, whole genome shotgun sequence (55772 bp)
Overview 1 RT 1: 31171-36300 bp Neighborhood of RT #1 [31171, 36302] InsE PHA02517 RVT-GII GIIM fecE Feature: gene Location: 31171-31473 bp Feature: domain Description: InsE Location: 31210-31459 bp Feature: domain Description: InsE Location: 31210-314 59 bp Feature: gene Location: 31715-31954 bp Feature: domain Description: PHA02517 Location: 31718-31889 bp Feature: domain Description: PHA02517 Location: 31718-31889 bp Feature: gene Location: 32546-34069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32819-33551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32819-33551 bp Feature: domain Description: GIIM Note: maturase Location: 33626-33824 bp Feature: domain Description: GIIM Note: maturase Location: 33626-33824 bp Feature: gene Location: 34720-34977 bp Feature: gene Location: 35535-36302 bp Feature: domain Description: fecE Location: 35538-36300 bp Feature: domain Description: fecE Location: 35538-36300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fecE (PRK11231)

Seq: AMVU01000027.1 Escherichia coli O104:H4 str. 11-02093 supercont1.33, whole genome shotgun sequence (2710 bp)
Overview 1 RT 1: 1-2179 bp Neighborhood of RT #1 [1, 2179] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16-5 44 bp Feature: domain Description: GIIM Note: maturase Location: 619-817 bp Feature: domain Description: GIIM Note: maturase Location: 619-817 bp Feature: gene Location: 1254-1625 bp Feature: domain Description: PHA02517 Location: 1257-1623 bp Feature: domain Description: PHA025 17 Location: 125 7-1623 bp Feature: gene Location: 1829-2179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: AMVU01000013.1 Escherichia coli O104:H4 str. 11-02093 supercont1.20, whole genome shotgun sequence (26454 bp)
Overview 1 RT 1: 9511-15592 bp Neighborhood of RT #1 [9511, 15594] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 9511-11709 bp Feature: domain Description: TonB-siderophor Location: 9646-11707 bp Feature: domain Description: TonB-siderophor Location: 96 46 -11707 bp Feature: gene Location: 12111-12482 bp Feature: domain Description: PHA02517 Location: 12114-12480 bp Feature: domain Description: PHA02517 Location: 12114-12480 bp Feature: gene Location: 12674-14197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12947-13679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12947-136 79 bp Feature: domain Description: GIIM Note: maturase Location: 13754-13952 bp Feature: domain Description: GIIM Note: maturase Location: 13754-13952 bp Feature: gene Location: 14789-15268 bp Feature: domain Description: PHA02517 Location: 14849-15203 bp Feature: domain Description: PHA02517 Location: 14849-15203 bp Feature: gene Location: 15268-15594 bp Feature: domain Description: InsE Location: 15271-15592 bp Feature: domain Description: InsE Location: 15271-15592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), TonB-siderophor (TIGR01783)