myRT

myRT report for GCA_000320095.1_Esch_coli_11-02281_V1

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Seq: AMVV01000018.1 Escherichia coli O104:H4 str. 11-02281 supercont1.25, whole genome shotgun sequence (6268 bp)
Overview 1 RT 1: 4411-6261 bp Neighborhood of RT #1 [4411, 6268] InsE PHA02517 RVT-GII Feature: gene Location: 4411-4737 bp Feature: domain Description: InsE Location: 4414-4735 bp Feature: domain Description: InsE Location: 441 4-4735 bp Feature: gene Location: 4737-5216 bp Feature: domain Description: PHA02517 Location: 4797-5151 bp Feature: domain Description: PHA0251 7 Location: 4797-51 51 bp Feature: gene Location: 5808-6268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6081-6261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6081 -6261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: AMVV01000006.1 Escherichia coli O104:H4 str. 11-02281 supercont1.14, whole genome shotgun sequence (10915 bp)
Overview 1 RT 1: 8318-10670 bp Neighborhood of RT #1 [8318, 10915] PHA02517 RVT-GII GIIM Feature: gene Location: 8318-8467 bp Feature: gene Location: 9024-9410 bp Feature: domain Description: PHA02517 Location: 9027-9408 bp Feature: domain Description: PHA02 517 Location: 902 7-9408 bp Feature: gene Location: 9587-10915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9665-10397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9665-10397 bp Feature: domain Description: GIIM Note: maturase Location: 10472-10670 bp Feature: domain Description: GIIM Note: maturase Location: 10472 -10670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMVV01000021.1 Escherichia coli O104:H4 str. 11-02281 supercont1.28, whole genome shotgun sequence (14750 bp)
Overview 1 RT 1: 10262-14505 bp Neighborhood of RT #1 [10262, 14750] TonB-siderophor PHA02517 RVT-GII GIIM Feature: gene Location: 10262-12457 bp Feature: domain Description: TonB-siderophor Location: 10394-12455 bp Feature: domain Description: TonB-siderophor Location: 103 94-12455 bp Feature: gene Location: 12859-13230 bp Feature: domain Description: PHA02517 Location: 12862-13228 bp Feature: domain Description: PHA02517 Location: 12862-13 228 bp Feature: gene Location: 13422-14750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13500-14232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 500-1423 2 bp Feature: domain Description: GIIM Note: maturase Location: 14307-14505 bp Feature: domain Description: GIIM Note: maturase Location: 143 07-14505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMVV01000007.1 Escherichia coli O104:H4 str. 11-02281 supercont1.15, whole genome shotgun sequence (635999 bp)
Overview 1 RT 1: 1-4549 bp Neighborhood of RT #1 [1, 4602] RVT-GII PHA02517 VI_ClpV1 Feature: gene Location: 1-461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274 -4 54 bp Feature: gene Location: 1053-1616 bp Feature: domain Description: PHA02517 Location: 1197-1551 bp Feature: domain Description: PHA02517 Location: 1197-1551 bp Feature: gene Location: 2053-4602 bp Feature: domain Description: VI_ClpV1 Location: 2089-4549 bp Feature: domain Description: VI_ClpV1 Location: 2089-4 54 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, VI_ClpV1 (TIGR03345)

Seq: AMVV01000019.1 Escherichia coli O104:H4 str. 11-02281 supercont1.26, whole genome shotgun sequence (9078 bp)
Overview 1 RT 1: 1-6173 bp Neighborhood of RT #1 [1, 6175] RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 1-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-811 bp Feature: domain Description: GIIM Note: maturase Location: 886-1084 bp Feature: domain Description: GIIM Note: maturase Location: 886-1084 bp Feature: gene Location: 1506-1892 bp Feature: domain Description: PHA02517 Location: 1509-1890 bp Feature: domain Description: PHA025 17 Location: 15 09-1890 bp Feature: gene Location: 2057-6175 bp Feature: domain Description: Peptidase_S6 Location: 2210-4382 bp Feature: domain Description: Peptidase_S6 Location: 2210-4382 bp Feature: domain Description: autotrans_barl Location: 4946-6173 bp Feature: domain Description: autotrans_barl Location: 4946-6173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: AMVV01000005.1 Escherichia coli O104:H4 str. 11-02281 supercont1.13, whole genome shotgun sequence (237170 bp)
Overview 1 RT 1: 233197-236774 bp Neighborhood of RT #1 [233197, 237019] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 233197-234348 bp Feature: domain Description: HTH_38 Location: 233206-233320 bp Feature: domain Description: HTH_38 Location: 233206 -233320 bp Feature: domain Description: Tra8 Location: 233356-234337 bp Feature: domain Description: Tra8 Location: 233356 -234337 bp Feature: gene Location: 234665-234904 bp Feature: domain Description: PHA02517 Location: 234668-234839 bp Feature: domain Description: PHA02517 Location: 2346 6 8-234839 bp Feature: gene Location: 235496-237019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235769-236501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23576 9-236 501 bp Feature: domain Description: GIIM Note: maturase Location: 236576-236774 bp Feature: domain Description: GIIM Note: maturase Location: 236 576 -236 774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMVV01000022.1 Escherichia coli O104:H4 str. 11-02281 supercont1.29, whole genome shotgun sequence (163340 bp)
Overview 1 RT 1: 1-1856 bp Neighborhood of RT #1 [1, 1858] RVT-GII PHA02517 InsE Feature: gene Location: 1-461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27 4-454 bp Feature: gene Location: 1053-1532 bp Feature: domain Description: PHA02517 Location: 1113-1467 bp Feature: domain Description: PHA02517 Location: 1113-1467 bp Feature: gene Location: 1532-1858 bp Feature: domain Description: InsE Location: 1535-1856 bp Feature: domain Description: InsE Location: 1535-1856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, InsE (COG2963)

Seq: AMVV01000024.1 Escherichia coli O104:H4 str. 11-02281 supercont1.30, whole genome shotgun sequence (33007 bp)
Overview 1 RT 1: 31172-33000 bp Neighborhood of RT #1 [31172, 33007] InsE PHA02517 RVT-GII Feature: gene Location: 31172-31474 bp Feature: domain Description: InsE Location: 31211-31460 bp Feature: domain Description: InsE Location: 31211-31460 bp Feature: gene Location: 31716-31955 bp Feature: domain Description: PHA02517 Location: 31719-31890 bp Feature: domain Description: PHA02517 Location: 31719-318 90 bp Feature: gene Location: 32547-33007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-33000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328 20-33000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: AMVV01000025.1 Escherichia coli O104:H4 str. 11-02281 supercont1.31, whole genome shotgun sequence (22740 bp)
Overview 1 RT 1: 1-3560 bp Neighborhood of RT #1 [1, 3562] RVT-GII GIIM fecE Feature: gene Location: 1-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79 -811 bp Feature: domain Description: GIIM Note: maturase Location: 886-1084 bp Feature: domain Description: GIIM Note: maturase Location: 886-1084 bp Feature: gene Location: 1980-2237 bp Feature: gene Location: 2795-3562 bp Feature: domain Description: fecE Location: 2798-3560 bp Feature: domain Description: fecE Location: 279 8-3560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), fecE (PRK11231)