myRT

myRT report for GCA_000320115.1_Esch_coli_11-02913_V1

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Seq: AMVX01000013.1 Escherichia coli O104:H4 str. 11-02913 supercont1.20, whole genome shotgun sequence (177825 bp)
Overview 1 RT 1: 10259-16340 bp Neighborhood of RT #1 [10259, 16342] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 10259-12457 bp Feature: domain Description: TonB-siderophor Location: 10394-12455 bp Feature: domain Description: TonB-siderophor Location: 1 0394-1 2455 bp Feature: gene Location: 12859-13230 bp Feature: domain Description: PHA02517 Location: 12862-13228 bp Feature: domain Description: PHA0251 7 Location: 1 2862-1 3228 bp Feature: gene Location: 13422-14945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13695-14427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3695-1 4427 bp Feature: domain Description: GIIM Note: maturase Location: 14502-14700 bp Feature: domain Description: GIIM Note: maturase Location: 1 4502-1 4700 bp Feature: gene Location: 15537-16016 bp Feature: domain Description: PHA02517 Location: 15597-15951 bp Feature: domain Description: PHA0251 7 Location: 1 5597-1 5951 bp Feature: gene Location: 16016-16342 bp Feature: domain Description: InsE Location: 16019-16340 bp Feature: domain Description: InsE Location: 1 601 9-1 6340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: AMVX01000004.1 Escherichia coli O104:H4 str. 11-02913 supercont1.12, whole genome shotgun sequence (836721 bp)
Overview 1 RT 1: 8318-15198 bp Neighborhood of RT #1 [8318, 15251] PHA02517 RVT-GII GIIM PHA02517 VI_ClpV1 Feature: gene Location: 8318-8467 bp Feature: gene Location: 9024-9410 bp Feature: domain Description: PHA02517 Location: 9027-9408 bp Feature: domain Description: PHA02 517 Location: 902 7-9408 bp Feature: gene Location: 9587-11110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9860-10592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9860-10592 bp Feature: domain Description: GIIM Note: maturase Location: 10667-10865 bp Feature: domain Description: GIIM Note: maturase Location: 10667-10865 bp Feature: gene Location: 11702-12265 bp Feature: domain Description: PHA02517 Location: 11846-12200 bp Feature: domain Description: PHA02 517 Location: 11846-12 2 00 bp Feature: gene Location: 12702-15251 bp Feature: domain Description: VI_ClpV1 Location: 12738-15198 bp Feature: domain Description: VI_ClpV1 Location: 12 738-15198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), VI_ClpV1 (TIGR03345), RVT-GII, GIIM (pfam08388)

Seq: AMVX01000002.1 Escherichia coli O104:H4 str. 11-02913 supercont1.10, whole genome shotgun sequence (329664 bp)
Overview 1 RT 1: 325998-329575 bp Neighborhood of RT #1 [325998, 329664] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 325998-327149 bp Feature: domain Description: HTH_38 Location: 326007-326121 bp Feature: domain Description: HTH_3 8 Location: 3 26007-3 26121 bp Feature: domain Description: Tra8 Location: 326157-327138 bp Feature: domain Description: Tra8 Location: 3 26157-3 2713 8 bp Feature: gene Location: 327466-327705 bp Feature: domain Description: PHA02517 Location: 327469-327640 bp Feature: domain Description: PHA02517 Location: 3 27469-3 27640 bp Feature: gene Location: 328297-329664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328570-329302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 28570-3 293 02 bp Feature: domain Description: GIIM Note: maturase Location: 329377-329575 bp Feature: domain Description: GIIM Note: maturase Location: 3 293 77-3 29575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMVX01000011.1 Escherichia coli O104:H4 str. 11-02913 supercont1.19, whole genome shotgun sequence (8908 bp)
Overview 1 RT 1: 1-6002 bp Neighborhood of RT #1 [1, 6004] RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 1-1158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -64 0 bp Feature: domain Description: GIIM Note: maturase Location: 715-913 bp Feature: domain Description: GIIM Note: maturase Location: 715-913 bp Feature: gene Location: 1335-1721 bp Feature: domain Description: PHA02517 Location: 1338-1719 bp Feature: domain Description: PHA02517 Location: 1338-1719 bp Feature: gene Location: 1886-6004 bp Feature: domain Description: Peptidase_S6 Location: 2039-4211 bp Feature: domain Description: Peptidase_S6 Location: 2039-4 211 bp Feature: domain Description: autotrans_barl Location: 4775-6002 bp Feature: domain Description: autotrans_barl Location: 4 775-6002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: AMVX01000014.1 Escherichia coli O104:H4 str. 11-02913 supercont1.21, whole genome shotgun sequence (369250 bp)
Overview 1 RT 1: 31172-36301 bp Neighborhood of RT #1 [31172, 36303] InsE PHA02517 RVT-GII GIIM fecE Feature: gene Location: 31172-31474 bp Feature: domain Description: InsE Location: 31211-31460 bp Feature: domain Description: InsE Location: 31211-31460 bp Feature: gene Location: 31716-31955 bp Feature: domain Description: PHA02517 Location: 31719-31890 bp Feature: domain Description: PHA025 17 Location: 31719-31890 bp Feature: gene Location: 32547-34070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-33552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-335 5 2 bp Feature: domain Description: GIIM Note: maturase Location: 33627-33825 bp Feature: domain Description: GIIM Note: maturase Location: 33627-33825 bp Feature: gene Location: 34721-34978 bp Feature: gene Location: 35536-36303 bp Feature: domain Description: fecE Location: 35539-36301 bp Feature: domain Description: fecE Location: 35 5 39-36301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fecE (PRK11231)