myRT

myRT report for GCA_000320135.1_Esch_coli_11-03439_V1

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Seq: AMVY01000016.1 Escherichia coli O104:H4 str. 11-03439 supercont1.23, whole genome shotgun sequence (9930 bp)
Overview 1 RT 1: 657-7024 bp Neighborhood of RT #1 [657, 7026] RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Feature: gene Location: 2357-2743 bp Feature: domain Description: PHA02517 Location: 2360-2741 bp Feature: domain Description: PHA0251 7 Location: 2360-2741 bp Feature: gene Location: 2908-7026 bp Feature: domain Description: Peptidase_S6 Location: 3061-5233 bp Feature: domain Description: Peptidase_S6 Location: 3061 -5233 bp Feature: domain Description: autotrans_barl Location: 5797-7024 bp Feature: domain Description: autotrans_barl Location: 5797-7024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), RVT-GII, GIIM (pfam08388)

Seq: AMVY01000017.1 Escherichia coli O104:H4 str. 11-03439 supercont1.24, whole genome shotgun sequence (16526 bp)
Overview 1 RT 1: 10259-16340 bp Neighborhood of RT #1 [10259, 16342] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 10259-12457 bp Feature: domain Description: TonB-siderophor Location: 10394-12455 bp Feature: domain Description: TonB-siderophor Location: 10394-12 455 bp Feature: gene Location: 12859-13230 bp Feature: domain Description: PHA02517 Location: 12862-13228 bp Feature: domain Description: PHA02 517 Location: 12 862 -132 2 8 bp Feature: gene Location: 13422-14945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13695-14427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13695-1442 7 bp Feature: domain Description: GIIM Note: maturase Location: 14502-14700 bp Feature: domain Description: GIIM Note: maturase Location: 14502 -14700 bp Feature: gene Location: 15537-16016 bp Feature: domain Description: PHA02517 Location: 15597-15951 bp Feature: domain Description: PHA02 517 Location: 15597-15951 bp Feature: gene Location: 16016-16342 bp Feature: domain Description: InsE Location: 16019-16340 bp Feature: domain Description: InsE Location: 16019-16340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: AMVY01000041.1 Escherichia coli O104:H4 str. 11-03439 supercont1.8, whole genome shotgun sequence (329954 bp)
Overview 1 RT 1: 325981-329558 bp Neighborhood of RT #1 [325981, 329803] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 325981-327132 bp Feature: domain Description: HTH_38 Location: 325990-326104 bp Feature: domain Description: HTH_3 8 Location: 3 25990-3 26104 bp Feature: domain Description: Tra8 Location: 326140-327121 bp Feature: domain Description: Tra8 Location: 3 26140-3 27121 bp Feature: gene Location: 327449-327688 bp Feature: domain Description: PHA02517 Location: 327452-327623 bp Feature: domain Description: PHA02517 Location: 3 27452-3 27623 bp Feature: gene Location: 328280-329803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328553-329285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 28553 -3 29285 bp Feature: domain Description: GIIM Note: maturase Location: 329360-329558 bp Feature: domain Description: GIIM Note: maturase Location: 3 293 60-3 29558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)