myRT

myRT report for GCA_000320155.1_Esch_coli_11-03943_V1

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Seq: AMWA01000017.1 Escherichia coli O104:H4 str. 11-03943 supercont1.24, whole genome shotgun sequence (19907 bp)
Overview 1 RT 1: 9511-15592 bp Neighborhood of RT #1 [9511, 15594] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 9511-11709 bp Feature: domain Description: TonB-siderophor Location: 9646-11707 bp Feature: domain Description: TonB-siderophor Location: 9646-1 1 707 bp Feature: gene Location: 12111-12482 bp Feature: domain Description: PHA02517 Location: 12114-12480 bp Feature: domain Description: PHA0251 7 Location: 1 21 1 4-1 2480 bp Feature: gene Location: 12674-14197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12947-13679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2947-1 3679 bp Feature: domain Description: GIIM Note: maturase Location: 13754-13952 bp Feature: domain Description: GIIM Note: maturase Location: 1 3754-1 3952 bp Feature: gene Location: 14789-15268 bp Feature: domain Description: PHA02517 Location: 14849-15203 bp Feature: domain Description: PHA0251 7 Location: 1 4849-1 5203 bp Feature: gene Location: 15268-15594 bp Feature: domain Description: InsE Location: 15271-15592 bp Feature: domain Description: InsE Location: 1 5271 -1 5592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), TonB-siderophor (TIGR01783)

Seq: AMWA01000015.1 Escherichia coli O104:H4 str. 11-03943 supercont1.22, whole genome shotgun sequence (8628 bp)
Overview 1 RT 1: 185-7949 bp Neighborhood of RT #1 [185, 7951] InsE PHA02517 RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 185-511 bp Feature: domain Description: InsE Location: 188-509 bp Feature: domain Description: InsE Location: 188-509 bp Feature: gene Location: 511-990 bp Feature: domain Description: PHA02517 Location: 571-925 bp Feature: domain Description: PHA02 517 Location: 571-92 5 bp Feature: gene Location: 1582-3105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1855-2587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1855-2 587 bp Feature: domain Description: GIIM Note: maturase Location: 2662-2860 bp Feature: domain Description: GIIM Note: maturase Location: 2 662 -2 860 bp Feature: gene Location: 3282-3668 bp Feature: domain Description: PHA02517 Location: 3285-3666 bp Feature: domain Description: PHA02 517 Location: 32 85-3666 bp Feature: gene Location: 3833-7951 bp Feature: domain Description: Peptidase_S6 Location: 3986-6158 bp Feature: domain Description: Peptidase_S6 Location: 3986-6158 bp Feature: domain Description: autotrans_barl Location: 6722-7949 bp Feature: domain Description: autotrans_barl Location: 672 2 -7949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), PHA02517 (putative transposase OrfB; Reviewed)

Seq: AMWA01000021.1 Escherichia coli O104:H4 str. 11-03943 supercont1.28, whole genome shotgun sequence (46772 bp)
Overview 1 RT 1: 31172-36301 bp Neighborhood of RT #1 [31172, 36303] InsE PHA02517 RVT-GII GIIM fecE Feature: gene Location: 31172-31474 bp Feature: domain Description: InsE Location: 31211-31460 bp Feature: domain Description: InsE Location: 3 1211-3 1460 bp Feature: gene Location: 31716-31955 bp Feature: domain Description: PHA02517 Location: 31719-31890 bp Feature: domain Description: PHA02517 Location: 3 1719-3 1890 bp Feature: gene Location: 32547-34070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32820-33552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 2820-3 3 552 bp Feature: domain Description: GIIM Note: maturase Location: 33627-33825 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 627-3 3 825 bp Feature: gene Location: 34721-34978 bp Feature: gene Location: 35536-36303 bp Feature: domain Description: fecE Location: 35539-36301 bp Feature: domain Description: fecE Location: 3 553 9-3 63 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fecE (PRK11231)

Seq: AMWA01000003.1 Escherichia coli O104:H4 str. 11-03943 supercont1.11, whole genome shotgun sequence (237071 bp)
Overview 1 RT 1: 233051-236628 bp Neighborhood of RT #1 [233051, 236873] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 233051-234202 bp Feature: domain Description: HTH_38 Location: 233060-233174 bp Feature: domain Description: HTH_38 Location: 233060-233174 bp Feature: domain Description: Tra8 Location: 233210-234191 bp Feature: domain Description: Tra8 Location: 233210-234 191 bp Feature: gene Location: 234519-234758 bp Feature: domain Description: PHA02517 Location: 234522-234693 bp Feature: domain Description: PHA02517 Location: 234 522-234 693 bp Feature: gene Location: 235350-236873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235623-236355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235623-236355 bp Feature: domain Description: GIIM Note: maturase Location: 236430-236628 bp Feature: domain Description: GIIM Note: maturase Location: 2364 30-236628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AMWA01000005.1 Escherichia coli O104:H4 str. 11-03943 supercont1.13, whole genome shotgun sequence (680099 bp)
Overview 1 RT 1: 8318-15198 bp Neighborhood of RT #1 [8318, 15251] PHA02517 RVT-GII GIIM PHA02517 VI_ClpV1 Feature: gene Location: 8318-8467 bp Feature: gene Location: 9024-9410 bp Feature: domain Description: PHA02517 Location: 9027-9408 bp Feature: domain Description: PHA025 17 Location: 9027-9408 bp Feature: gene Location: 9587-11110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9860-10592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9860-105 92 bp Feature: domain Description: GIIM Note: maturase Location: 10667-10865 bp Feature: domain Description: GIIM Note: maturase Location: 10667-10865 bp Feature: gene Location: 11702-12265 bp Feature: domain Description: PHA02517 Location: 11846-12200 bp Feature: domain Description: PHA025 17 Location: 11846-12200 bp Feature: gene Location: 12702-15251 bp Feature: domain Description: VI_ClpV1 Location: 12738-15198 bp Feature: domain Description: VI_ClpV1 Location: 12738-15 198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), VI_ClpV1 (TIGR03345), RVT-GII, GIIM (pfam08388)