myRT

myRT report for GCA_000320275.1_Esch_coli_Ec12-0466_V1

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Seq: KB021457.1 Escherichia coli O104:H4 str. Ec12-0466 genomic scaffold supercont1.12, whole genome shotgun sequence (73387 bp)
Overview 1 RT 1: 1-2275 bp Neighborhood of RT #1 [1, 2275] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-640 bp Feature: domain Description: GIIM Note: maturase Location: 715-913 bp Feature: domain Description: GIIM Note: maturase Location: 71 5-91 3 bp Feature: gene Location: 1350-1721 bp Feature: domain Description: PHA02517 Location: 1353-1719 bp Feature: domain Description: PHA0251 7 Location: 1 353-1 71 9 bp Feature: gene Location: 1925-2275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: KB021455.1 Escherichia coli O104:H4 str. Ec12-0466 genomic scaffold supercont1.10, whole genome shotgun sequence (1874923 bp)
Overview 1 RT 1: 20712-26793 bp 2 RT 2: 219160-223820 bp Neighborhood of RT #1 [20712, 26795] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [219160, 223822] InsE PHA02517 RVT-GII GIIM fecE Feature: gene Location: 20712-22910 bp Feature: domain Description: TonB-siderophor Location: 20847-22908 bp Feature: domain Description: TonB-siderophor Location: 2 0847-2 2 908 bp Feature: gene Location: 23312-23683 bp Feature: domain Description: PHA02517 Location: 23315-23681 bp Feature: domain Description: PHA02 517 Location: 2 3315-2 3681 bp Feature: gene Location: 23875-25398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24148-24880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4148-2 4880 bp Feature: domain Description: GIIM Note: maturase Location: 24955-25153 bp Feature: domain Description: GIIM Note: maturase Location: 2 4955-2 5153 bp Feature: gene Location: 25990-26469 bp Feature: domain Description: PHA02517 Location: 26050-26404 bp Feature: domain Description: PHA02 517 Location: 2 6050-2 6404 bp Feature: gene Location: 26469-26795 bp Feature: domain Description: InsE Location: 26472-26793 bp Feature: domain Description: InsE Location: 2 6472 -2 6793 bp Feature: gene Location: 219160-219462 bp Feature: domain Description: InsE Location: 219199-219448 bp Feature: domain Description: InsE Location: 2 19199-2 19448 bp Feature: gene Location: 219704-219943 bp Feature: domain Description: PHA02517 Location: 219707-219878 bp Feature: domain Description: PHA02 517 Location: 2 19707-2 19878 bp Feature: gene Location: 220432-221589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220435-221071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 0435-2 2 1071 bp Feature: domain Description: GIIM Note: maturase Location: 221146-221344 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 1146-2 2 1344 bp Feature: gene Location: 222240-222497 bp Feature: gene Location: 223055-223822 bp Feature: domain Description: fecE Location: 223058-223820 bp Feature: domain Description: fecE Location: 2 2 3058-2 2 382 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), fecE (PRK11231)

Seq: KB021454.1 Escherichia coli O104:H4 str. Ec12-0466 genomic scaffold supercont1.9, whole genome shotgun sequence (1418770 bp)
Overview 1 RT 1: 8200-14080 bp Neighborhood of RT #1 [8200, 14133] PHA02517 RVT-GII GIIM PHA02517 VI_ClpV1 Feature: gene Location: 8200-8349 bp Feature: gene Location: 8906-9292 bp Feature: domain Description: PHA02517 Location: 8909-9290 bp Feature: domain Description: PHA02517 Location: 8909-9290 bp Feature: gene Location: 9469-10626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9472-10108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9472-10108 bp Feature: domain Description: GIIM Note: maturase Location: 10183-10381 bp Feature: domain Description: GIIM Note: maturase Location: 10183 -103 81 bp Feature: gene Location: 10637-11147 bp Feature: domain Description: PHA02517 Location: 10781-11147 bp Feature: domain Description: PHA02517 Location: 10781-11147 bp Feature: gene Location: 11584-14133 bp Feature: domain Description: VI_ClpV1 Location: 11620-14080 bp Feature: domain Description: VI_ClpV1 Location: 11620-14080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), VI_ClpV1 (TIGR03345), RVT-GII, GIIM (pfam08388)