myRT

myRT report for GCA_000322205.1_Ente_faec_E2297_V1

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Seq: KB029958.1 Enterococcus faecium E2297 genomic scaffold acsaT-supercont1.6, whole genome shotgun sequence (228143 bp)
Overview 1 RT 1: 103073-115468 bp Neighborhood of RT #1 [103073, 115476] TcpE ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Zeta_toxin RVT-GII HNHc FtsK RelB_DinJ Feature: gene Location: 103073-103462 bp Ori: ELB47925.1 Feature: domain Description: TcpE Location: 103091-103391 bp Feature: domain Description: TcpE Location: 1 03091 -1 03391 bp Feature: gene Location: 103522-104025 bp Ori: ELB47926.1 Feature: domain Description: ArdA Location: 103540-104011 bp Feature: domain Description: ArdA Location: 1 03540-1 0401 1 bp Feature: gene Location: 104366-106276 bp Ori: ELB47927.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104699-105437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 04699-1 05437 bp Feature: domain Description: HNHc Note: nucleases Location: 105992-106157 bp Feature: domain Description: HNHc Note: nucleases Location: 1 05992-1 061 57 bp Feature: gene Location: 107022-107159 bp Ori: ELB47928.1 Feature: domain Description: DUF3789 Location: 107049-107142 bp Feature: domain Description: DUF3789 Location: 1 07049-1 071 42 bp Feature: gene Location: 107156-108340 bp Ori: ELB47929.1 Feature: domain Description: HTH_XRE Location: 107186-107330 bp Feature: domain Description: HTH_XRE Location: 1 071 86-1 07330 bp Feature: domain Description: Rol_Rep_N Location: 107363-107627 bp Feature: domain Description: Rol_Rep_N Location: 1 07363-1 07627 bp Feature: domain Description: Rep_trans Location: 107651-108263 bp Feature: domain Description: Rep_trans Location: 1 07651 -1 08263 bp Feature: gene Location: 110254-110928 bp Ori: ELB47934.1 Feature: domain Description: Zeta_toxin Location: 110353-110836 bp Feature: domain Description: Zeta_toxin Location: 1 1 0353-1 1 0836 bp Feature: gene Location: 111006-111245 bp Feature: gene Location: 111339-113198 bp Ori: ELB47936.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111648-112389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 648-1 1 2389 bp Feature: domain Description: HNHc Note: nucleases Location: 112944-113082 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 2944-1 1 3082 bp Feature: gene Location: 113913-115058 bp Ori: ELB47937.1 Feature: domain Description: FtsK Location: 114573-115038 bp Feature: domain Description: FtsK Location: 1 1 4573-1 1 5038 bp Feature: gene Location: 115141-115476 bp Ori: ELB47938.1 Feature: domain Description: RelB_DinJ Location: 115345-115468 bp Feature: domain Description: RelB_DinJ Location: 1 1 5345-1 1 5468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), Zeta_toxin (pfam06414), FtsK (COG1674)
RelB_DinJ (TIGR02384)

Seq: KB029948.1 Enterococcus faecium E2297 genomic scaffold acsaT-supercont1.14, whole genome shotgun sequence (36566 bp)
Overview 1 RT 1: 33672-35761 bp Neighborhood of RT #1 [33672, 36423] Rve RVT-AbiP2 Feature: gene Location: 33672-33989 bp Feature: gene Location: 34064-34744 bp Ori: ELB45878.1 Feature: domain Description: Rve Location: 34067-34715 bp Feature: domain Description: Rve Location: 34067-34715 bp Feature: gene Location: 35035-36423 bp Ori: ELB45879.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35296-35761 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 352 96-35761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-AbiP2

Seq: KB029960.1 Enterococcus faecium E2297 genomic scaffold acsaT-supercont1.8, whole genome shotgun sequence (211947 bp)
Overview 1 RT 1: 171986-178668 bp Neighborhood of RT #1 [171986, 178745] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA PHP_HisPPase SMC_prok_B SMC_prok_B Feature: gene Location: 171986-173170 bp Ori: ELB47031.1 Feature: domain Description: HTH_XRE Location: 172016-172160 bp Feature: domain Description: HTH_XRE Location: 172016-172160 bp Feature: domain Description: Rol_Rep_N Location: 172193-172457 bp Feature: domain Description: Rol_Rep_N Location: 172193 -172457 bp Feature: domain Description: Rep_trans Location: 172481-173093 bp Feature: domain Description: Rep_trans Location: 172481-173 093 bp Feature: gene Location: 173167-173304 bp Ori: ELB47032.1 Feature: domain Description: DUF3789 Location: 173194-173287 bp Feature: domain Description: DUF3 789 Location: 173 194-173 287 bp Feature: gene Location: 174050-175960 bp Ori: ELB47033.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174383-175121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1743 83 -175121 bp Feature: domain Description: HNHc Note: nucleases Location: 175676-175841 bp Feature: domain Description: HNHc Note: nucleases Location: 175676-175841 bp Feature: gene Location: 176301-176801 bp Ori: ELB47034.1 Feature: domain Description: ArdA Location: 176319-176790 bp Feature: domain Description: ArdA Location: 1763 19-176790 bp Feature: gene Location: 176898-178745 bp Ori: ELB47035.1 Feature: domain Description: PHP_HisPPase Location: 176925-177402 bp Feature: domain Description: PHP_HisPPase Location: 176925-177402 bp Feature: domain Description: SMC_prok_B Location: 177804-177903 bp Feature: domain Description: SMC_prok_B Location: 177804-177903 bp Feature: domain Description: SMC_prok_B Location: 178233-178668 bp Feature: domain Description: SMC_prok_B Location: 17823 3 -178668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664), RVT-GII, HNHc (smart00507), ArdA (pfam07275), PHP_HisPPase (cd07432), SMC_prok_B (TIGR02168)