myRT

myRT report for GCA_000322565.1_ASM32256v1

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Seq: ANPZ01000012.1 Streptococcus agalactiae FSL S3-034 ctg7180000004420, whole genome shotgun sequence (23712 bp)
Overview 1 RT 1: 20398-23522 bp Neighborhood of RT #1 [20398, 23710] PepO M13 RVT-GII GIIM Feature: gene Location: 20398-21804 bp Feature: domain Description: PepO Location: 20407-21802 bp Feature: domain Description: PepO Location: 20407-21 802 bp Feature: gene Location: 21753-22430 bp Feature: domain Description: M13 Location: 21885-22365 bp Feature: domain Description: M1 3 Location: 21 885-22365 bp Feature: gene Location: 22580-23710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22637-23252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22637-23252 bp Feature: domain Description: GIIM Note: maturase Location: 23306-23522 bp Feature: domain Description: GIIM Note: maturase Location: 23306-23522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepO (COG3590), M13 (cd08662), RVT-GII, GIIM (pfam08388)

Seq: ANPZ01000014.1 Streptococcus agalactiae FSL S3-034 ctg7180000004422, whole genome shotgun sequence (14927 bp)
Overview 1 RT 1: 9884-14737 bp Neighborhood of RT #1 [9884, 14925] PRK05764 PRK07246 RVT-GII GIIM Feature: gene Location: 9884-11077 bp Feature: domain Description: PRK05764 Location: 9890-11063 bp Feature: domain Description: PRK05764 Location: 9890-11063 bp Feature: gene Location: 11163-13628 bp Feature: domain Description: PRK07246 Location: 11166-13626 bp Feature: domain Description: PRK072 46 Location: 11166-1362 6 bp Feature: gene Location: 13795-14925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13852-14467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13852 -14467 bp Feature: domain Description: GIIM Note: maturase Location: 14521-14737 bp Feature: domain Description: GIIM Note: maturase Location: 1452 1-14737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07246 (bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated), RVT-GII, GIIM (pfam08388), PRK05764 (aspartate aminotransferase; Provisional)

Seq: ANPZ01000015.1 Streptococcus agalactiae FSL S3-034 ctg7180000004423, whole genome shotgun sequence (20323 bp)
Overview 1 RT 1: 2-7795 bp Neighborhood of RT #1 [2, 7824] PHA02517 RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 Feature: gene Location: 2-226 bp Feature: domain Description: PHA02517 Location: 8-221 bp Feature: domain Description: PHA02517 Location: 8-221 bp Feature: gene Location: 254-964 bp Feature: gene Location: 1098-2756 bp Feature: RT Description: RVT_N Location: 1143-1386 bp Feature: RT Description: RVT_N Location: 1143 -13 86 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1431-2079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 1-2079 bp Feature: domain Description: GIIM Note: maturase Location: 2136-2364 bp Feature: domain Description: GIIM Note: maturase Location: 213 6-23 64 bp Feature: gene Location: 2870-3163 bp Feature: gene Location: 3316-7824 bp Feature: domain Description: N6_Mtase Location: 3838-4429 bp Feature: domain Description: N6_Mtase Location: 3 83 8-4429 bp Feature: domain Description: COG4646 Location: 5020-7327 bp Feature: domain Description: COG4646 Location: 5020-73 27 bp Feature: domain Description: KOG0390 Location: 7594-7795 bp Feature: domain Description: KOG03 90 Location: 7594-7795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family )

Seq: ANPZ01000019.1 Streptococcus agalactiae FSL S3-034 ctg7180000004427, whole genome shotgun sequence (15344 bp)
Overview 1 RT 1: 151-5785 bp Neighborhood of RT #1 [151, 5868] TraC-F-type RVT_N RVT-GII GIIM TraC-F-type PrgI Feature: gene Location: 151-897 bp Feature: gene Location: 894-1943 bp Feature: domain Description: TraC-F-type Location: 1068-1764 bp Feature: domain Description: TraC-F-type Location: 1068-1764 bp Feature: gene Location: 1867-3564 bp Feature: RT Description: RVT_N Location: 1963-2203 bp Feature: RT Description: RVT_N Location: 1963-2203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2251-2911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2251-2911 bp Feature: domain Description: GIIM Note: maturase Location: 2980-3199 bp Feature: domain Description: GIIM Note: maturase Location: 2980-3199 bp Feature: gene Location: 4074-5558 bp Feature: domain Description: TraC-F-type Location: 4392-5247 bp Feature: domain Description: TraC-F-type Location: 4 392-524 7 bp Feature: gene Location: 5515-5868 bp Feature: domain Description: PrgI Location: 5527-5785 bp Feature: domain Description: PrgI Location: 5527-5785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraC-F-type (TIGR02746), PrgI (pfam12666)

Seq: ANPZ01000042.1 Streptococcus agalactiae FSL S3-034 ctg7180000004450, whole genome shotgun sequence (66070 bp)
Overview 1 RT 1: 63146-65880 bp Neighborhood of RT #1 [63146, 66068] DUF4956 PolyPPase_VTC_like RVT-GII GIIM Feature: gene Location: 63146-63823 bp Feature: domain Description: DUF4956 Location: 63233-63596 bp Feature: domain Description: DUF495 6 Location: 63233-635 96 bp Feature: gene Location: 63875-64486 bp Feature: domain Description: PolyPPase_VTC_like Location: 63878-64451 bp Feature: domain Description: PolyPPase_VTC_like Location: 63878-6445 1 bp Feature: gene Location: 64938-66068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64995-65610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64995 -65 610 bp Feature: domain Description: GIIM Note: maturase Location: 65664-65880 bp Feature: domain Description: GIIM Note: maturase Location: 65 664-65 880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4956 (pfam16316), PolyPPase_VTC_like (cd07750), RVT-GII, GIIM (pfam08388)

Seq: ANPZ01000045.1 Streptococcus agalactiae FSL S3-034 ctg7180000004453, whole genome shotgun sequence (51276 bp)
Overview 1 RT 1: 3-3237 bp Neighborhood of RT #1 [3, 3263] RVT-GII GIIM MurC Feature: gene Location: 3-1133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60-675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 0-6 75 bp Feature: domain Description: GIIM Note: maturase Location: 729-945 bp Feature: domain Description: GIIM Note: maturase Location: 729-945 bp Feature: gene Location: 1305-1922 bp Feature: gene Location: 1932-3263 bp Feature: domain Description: MurC Location: 1941-3237 bp Feature: domain Description: MurC Location: 1941-3237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MurC (COG0773), RVT-GII, GIIM (pfam08388)

Seq: ANPZ01000051.1 Streptococcus agalactiae FSL S3-034 ctg7180000004459, whole genome shotgun sequence (34876 bp)
Overview 1 RT 1: 32234-34686 bp Neighborhood of RT #1 [32234, 34874] PhoE PRK08295 RVT-GII GIIM Feature: gene Location: 32234-32926 bp Feature: domain Description: PhoE Location: 32243-32903 bp Feature: domain Description: PhoE Location: 32243-32903 bp Feature: gene Location: 33049-33528 bp Feature: domain Description: PRK08295 Location: 33061-33289 bp Feature: domain Description: PRK08295 Location: 33061-33289 bp Feature: gene Location: 33744-34874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33801-34416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33801-34416 bp Feature: domain Description: GIIM Note: maturase Location: 34470-34686 bp Feature: domain Description: GIIM Note: maturase Location: 3447 0-34686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhoE (COG0406), PRK08295 (RNA polymerase sporulation sigma factor SigH), RVT-GII, GIIM (pfam08388)

Seq: ANPZ01000063.1 Streptococcus agalactiae FSL S3-034 ctg7180000004471, whole genome shotgun sequence (21029 bp)
Overview 1 RT 1: 17703-20839 bp Neighborhood of RT #1 [17703, 21027] MurE COG3442 RVT-GII GIIM Feature: gene Location: 17703-19046 bp Feature: domain Description: MurE Location: 17736-19041 bp Feature: domain Description: MurE Location: 17736-19041 bp Feature: gene Location: 19160-19831 bp Feature: domain Description: COG3442 Location: 19163-19820 bp Feature: domain Description: COG3442 Location: 19163-198 20 bp Feature: gene Location: 19897-21027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19954-20569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19954-20569 bp Feature: domain Description: GIIM Note: maturase Location: 20623-20839 bp Feature: domain Description: GIIM Note: maturase Location: 20623-208 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MurE (COG0769), COG3442 (Glutamine amidotransferase related to the GATase domain of CobQ ), RVT-GII, GIIM (pfam08388)

Seq: ANPZ01000076.1 Streptococcus agalactiae FSL S3-034 ctg7180000004484, whole genome shotgun sequence (27856 bp)
Overview 1 RT 1: 24300-27666 bp Neighborhood of RT #1 [24300, 27854] Pgk lipo_e_P4 RVT-GII GIIM Feature: gene Location: 24300-25496 bp Feature: domain Description: Pgk Location: 24306-25491 bp Feature: domain Description: Pgk Location: 24306-2549 1 bp Feature: gene Location: 25631-26500 bp Feature: domain Description: lipo_e_P4 Location: 25634-26495 bp Feature: domain Description: lipo_e_P4 Location: 25634-2649 5 bp Feature: gene Location: 26724-27854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26781-27396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26781-2739 6 bp Feature: domain Description: GIIM Note: maturase Location: 27450-27666 bp Feature: domain Description: GIIM Note: maturase Location: 27450-27666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pgk (COG0126), lipo_e_P4 (TIGR01533), RVT-GII, GIIM (pfam08388)