myRT

myRT report for GCA_000322605.1_ASM32260v1

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Seq: ANPR01000010.1 Streptococcus agalactiae FSL S3-568 ctg7180000025470, whole genome shotgun sequence (24217 bp)
Overview 1 RT 1: 9458-18984 bp Neighborhood of RT #1 [9458, 18984] N6_Mtase COG4646 KOG0390 RVT_N RVT-GII GIIM Feature: gene Location: 9458-15454 bp Feature: domain Description: N6_Mtase Location: 11468-12059 bp Feature: domain Description: N6_Mtase Location: 1 1 468-1 2059 bp Feature: domain Description: COG4646 Location: 12650-14957 bp Feature: domain Description: COG4646 Location: 1 2650-1 4957 bp Feature: domain Description: KOG0390 Location: 15224-15425 bp Feature: domain Description: KOG0390 Location: 1 5224-1 5425 bp Feature: gene Location: 15629-15814 bp Feature: gene Location: 15822-17672 bp Feature: RT Description: RVT_N Location: 16059-16302 bp Feature: RT Description: RVT_N Location: 1 6059-1 6302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16347-16995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6347-1 6995 bp Feature: domain Description: GIIM Note: maturase Location: 17052-17280 bp Feature: domain Description: GIIM Note: maturase Location: 1 7052-1 7280 bp Feature: gene Location: 17806-18615 bp Feature: gene Location: 18685-18984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family )

Seq: ANPR01000022.1 Streptococcus agalactiae FSL S3-568 ctg7180000025487, whole genome shotgun sequence (18138 bp)
Overview 1 RT 1: 1-3360 bp Neighborhood of RT #1 [1, 3437] COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF Feature: gene Location: 1-540 bp Feature: domain Description: COG4646 Location: 10-400 bp Feature: domain Description: COG4646 Location: 10-400 bp Feature: gene Location: 1038-2816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1299-2091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 99-2 091 bp Feature: domain Description: Intron_maturas2 Location: 2202-2427 bp Feature: domain Description: Intron_maturas2 Location: 2 2 02 -2 42 7 bp Feature: domain Description: HNHc Note: nucleases Location: 2592-2778 bp Feature: domain Description: HNHc Note: nucleases Location: 2 592 -2 778 bp Feature: gene Location: 2954-3238 bp Feature: gene Location: 3183-3437 bp Feature: domain Description: SF2_C_SNF Location: 3234-3360 bp Feature: domain Description: SF2 _C_SNF Location: 32 34-3360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), COG4646 (Adenine-specific DNA methylase, N12 class ), SF2_C_SNF (cd18793)