myRT

myRT report for GCA_000322805.1_ASM32280v1

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Seq: ANPY01000034.1 Streptococcus agalactiae FSL S3-077 ctg7180000011547, whole genome shotgun sequence (38720 bp)
Overview 1 RT 1: 5424-14921 bp Neighborhood of RT #1 [5424, 14950] RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 Feature: gene Location: 5424-5723 bp Feature: gene Location: 5793-6602 bp Feature: gene Location: 6736-8514 bp Feature: RT Description: RVT_N Location: 6901-7144 bp Feature: RT Description: RVT_N Location: 6901 -71 44 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7189-7837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 89-7837 bp Feature: domain Description: GIIM Note: maturase Location: 7894-8122 bp Feature: domain Description: GIIM Note: maturase Location: 7894-81 22 bp Feature: gene Location: 8508-8801 bp Feature: gene Location: 8954-14950 bp Feature: domain Description: N6_Mtase Location: 10964-11555 bp Feature: domain Description: N6_Mtase Location: 1 0964-1 1 555 bp Feature: domain Description: COG4646 Location: 12146-14453 bp Feature: domain Description: COG4646 Location: 1 21 46-1 4453 bp Feature: domain Description: KOG0390 Location: 14720-14921 bp Feature: domain Description: KOG0390 Location: 1 4720-1 4921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family )

Seq: ANPY01000071.1 Streptococcus agalactiae FSL S3-077 ctg7180000011584, whole genome shotgun sequence (93532 bp)
Overview 1 RT 1: 86468-91144 bp Neighborhood of RT #1 [86468, 91170] HTH_XRE RVT-Retrons ImmA COG2932 Feature: gene Location: 86468-86761 bp Feature: gene Location: 87005-87349 bp Feature: domain Description: HTH_XRE Location: 87020-87188 bp Feature: domain Description: HTH_XRE Location: 8702 0-87188 bp Feature: gene Location: 87661-89484 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87787-88384 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87787-88384 bp Feature: gene Location: 89550-90473 bp Feature: domain Description: ImmA Location: 89721-90105 bp Feature: domain Description: ImmA Location: 8972 1-90105 bp Feature: gene Location: 90484-91170 bp Feature: domain Description: COG2932 Location: 90529-91144 bp Feature: domain Description: COG2 932 Location: 9052 9-91144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, ImmA (COG2856), COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains )