myRT

myRT report for GCA_000323125.1_ASM32312v1

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Seq: ANPV01000043.1 Streptococcus agalactiae FSL S3-229 ctg7180000003792, whole genome shotgun sequence (64958 bp)
Overview 1 RT 1: 4390-9092 bp Neighborhood of RT #1 [4390, 9092] COG2932 ImmA RVT-Retrons HTH_XRE Feature: gene Location: 4390-5076 bp Feature: domain Description: COG2932 Location: 4435-5050 bp Feature: domain Description: COG2932 Location: 4435-5050 bp Feature: gene Location: 5087-6010 bp Feature: domain Description: ImmA Location: 5258-5642 bp Feature: domain Description: ImmA Location: 5258-5642 bp Feature: gene Location: 6076-7899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6202-6799 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6202-6799 bp Feature: gene Location: 8211-8555 bp Feature: domain Description: HTH_XRE Location: 8226-8394 bp Feature: domain Description: HTH_XRE Location: 8226-8394 bp Feature: gene Location: 8799-9092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), ImmA (COG2856), RVT-Retrons, HTH_XRE (smart00530)

Seq: ANPV01000076.1 Streptococcus agalactiae FSL S3-229 ctg7180000003879, whole genome shotgun sequence (38038 bp)
Overview 1 RT 1: 5244-14741 bp Neighborhood of RT #1 [5244, 14770] RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 Feature: gene Location: 5244-5543 bp Feature: gene Location: 5613-6422 bp Feature: gene Location: 6556-8334 bp Feature: RT Description: RVT_N Location: 6721-6964 bp Feature: RT Description: RVT_N Location: 672 1-6964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7009-7657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7009-7657 bp Feature: domain Description: GIIM Note: maturase Location: 7714-7942 bp Feature: domain Description: GIIM Note: maturase Location: 7714-7942 bp Feature: gene Location: 8328-8621 bp Feature: gene Location: 8774-14770 bp Feature: domain Description: N6_Mtase Location: 10784-11375 bp Feature: domain Description: N6_Mtase Location: 10784-11375 bp Feature: domain Description: COG4646 Location: 11966-14273 bp Feature: domain Description: COG4646 Location: 11966-142 73 bp Feature: domain Description: KOG0390 Location: 14540-14741 bp Feature: domain Description: KOG0390 Location: 14540-14741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family )