myRT

myRT report for GCA_000326765.1_Esch_coli_KTE166_V1

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Seq: ANYK01000061.1 Escherichia coli KTE166 acwoN-supercont1.61, whole genome shotgun sequence (10589 bp)
Overview 1 RT 1: 6816-10589 bp Neighborhood of RT #1 [6816, 10589] HTH_23 InsE TnpB_IS66 RVT_N RVT-GII YkfC HNHc Csm1_N Csm1_N Feature: gene Location: 6816-7463 bp Feature: domain Description: HTH_23 Location: 6849-6957 bp Feature: domain Description: HTH_23 Location: 6849-6957 bp Feature: domain Description: InsE Location: 7089-7443 bp Feature: domain Description: InsE Location: 7089-7443 bp Feature: gene Location: 7463-7774 bp Feature: domain Description: TnpB_IS66 Location: 7490-7769 bp Feature: domain Description: TnpB_IS66 Location: 7490-7769 bp Feature: gene Location: 8372-10042 bp Feature: RT Description: RVT_N Location: 8420-8663 bp Feature: RT Description: RVT_N Location: 8420-8663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8708-9350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8708-9350 bp Feature: domain Description: YkfC Location: 9482-9662 bp Feature: domain Description: YkfC Location: 9482-9662 bp Feature: domain Description: HNHc Note: nucleases Location: 9848-10007 bp Feature: domain Description: HNHc Note: nucleases Location: 9848-1 0007 bp Feature: gene Location: 10185-10412 bp Feature: domain Description: Csm1_N Location: 10200-10266 bp Feature: domain Description: Csm1 _N Location: 1 0200-1 0266 bp Feature: domain Description: Csm1_N Location: 10275-10353 bp Feature: domain Description: Csm1 _N Location: 1 0275-1 0353 bp Feature: gene Location: 10422-10589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csm1_N (pfam18504), HTH_23 (pfam13384), InsE (COG2963), TnpB_IS66 (pfam05717), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: ANYK01000067.1 Escherichia coli KTE166 acwoN-supercont1.67, whole genome shotgun sequence (183062 bp)
Overview 1 RT 1: 48420-52302 bp Neighborhood of RT #1 [48420, 52307] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 48420-48878 bp Feature: domain Description: dut Location: 48426-48873 bp Feature: domain Description: dut Location: 4842 6-48873 bp Feature: gene Location: 48985-49581 bp Feature: domain Description: slmA Location: 48991-49567 bp Feature: domain Description: slmA Location: 48991-49567 bp Feature: gene Location: 49627-50586 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49762-50311 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49762 -50311 bp Feature: gene Location: 50884-51525 bp Feature: domain Description: pyrE Location: 50887-51520 bp Feature: domain Description: pyrE Location: 50887-5152 0 bp Feature: gene Location: 51591-52307 bp Feature: domain Description: rph Location: 51594-52302 bp Feature: domain Description: rph Location: 51594-52 302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)