myRT

myRT report for GCA_000331105.1_ASM33110v1

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Seq: HE796683.1 Fibrella aestuarina BUZ 2 drat genome (6775444 bp)
Overview 1 RT 1: 947779-953386 bp 2 RT 2: 4364529-4372360 bp Neighborhood of RT #1 [947779, 953415] Abhydrolase_6 PolY_Pol_V_umuC RVT_N RVT-GII GIIM HNHc GH43_62_32_68_117_130-like GH43_62_32_68_117_130-like Por_Secre_tail Neighborhood of RT #2 [4364529, 4375329] ERG3 KOG4714 Sortilin-Vps10 Sortilin-Vps10 Sortilin-Vps10 RVT-Retrons WGR_DNA_ligase Feature: gene Location: 947779-948459 bp Feature: domain Description: Abhydrolase_6 Location: 947833-948316 bp Feature: domain Description: Abhydrolase_6 Location: 947833-94831 6 bp Feature: gene Location: 948777-949214 bp Feature: domain Description: PolY_Pol_V_umuC Location: 948864-949206 bp Feature: domain Description: PolY_Pol_V_umuC Location: 948864-949206 bp Feature: gene Location: 949214-950929 bp Feature: RT Description: RVT_N Location: 949271-949514 bp Feature: RT Description: RVT_N Location: 949271 -94951 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949559-950210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949559-95021 0 bp Feature: domain Description: GIIM Note: maturase Location: 950267-950495 bp Feature: domain Description: GIIM Note: maturase Location: 950267-950495 bp Feature: domain Description: HNHc Note: nucleases Location: 950726-950879 bp Feature: domain Description: HNHc Note: nucleases Location: 950726-950879 bp Feature: gene Location: 951553-951693 bp Feature: gene Location: 952201-953415 bp Feature: domain Description: GH43_62_32_68_117_130-like Location: 952606-952687 bp Feature: domain Description: GH43_62_32_68_1 1 7_1 30-like Location: 952606-952687 bp Feature: domain Description: GH43_62_32_68_117_130-like Location: 952978-953092 bp Feature: domain Description: GH43_62_32_68_1 1 7_1 30-like Location: 952978-953092 bp Feature: domain Description: Por_Secre_tail Location: 953194-953386 bp Feature: domain Description: Por_Secre_tail Location: 9531 94-953386 bp Feature: gene Location: 4364529-4365290 bp Feature: domain Description: ERG3 Location: 4364586-4365258 bp Feature: domain Description: ERG3 Location: 4364586-4365258 bp Feature: gene Location: 4365435-4368476 bp Feature: domain Description: KOG4714 Location: 4365678-4365867 bp Feature: domain Description: KOG471 4 Location: 4365678-4365867 bp Feature: domain Description: Sortilin-Vps10 Location: 4365903-4366338 bp Feature: domain Description: Sortilin-Vps1 0 Location: 4365903-4366338 bp Feature: domain Description: Sortilin-Vps10 Location: 4366650-4366998 bp Feature: domain Description: Sortilin-Vps1 0 Location: 4366650-4366998 bp Feature: domain Description: Sortilin-Vps10 Location: 4367670-4367925 bp Feature: domain Description: Sortilin-Vps1 0 Location: 4367670-4367925 bp Feature: gene Location: 4368572-4370071 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4369106-4369718 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43691 06-436971 8 bp Feature: gene Location: 4370470-4372107 bp Feature: gene Location: 4372123-4375329 bp Feature: domain Description: WGR_DNA_ligase Location: 4372141-4372360 bp Feature: domain Description: WGR_DNA_ligase Location: 43721 41 -4372360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Abhydrolase_6 (pfam12697), PolY_Pol_V_umuC (cd01700), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), GH43_62_32_68_117_130-like (cd08994), Por_Secre_tail (TIGR04183), ERG3 (COG3000), KOG4714 (KOG4714, Nucleoporin )
Sortilin-Vps10 (pfam15902), RVT-Retrons, WGR_DNA_ligase (cd07998)