myRT

myRT report for GCA_000332035.1_ASM33203v1

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Seq: ALVY01000183.1 Gloeocapsa sp. PCC 73106 scaffold_00183, whole genome shotgun sequence (31903 bp)
Overview 1 RT 1: 24933-29599 bp Neighborhood of RT #1 [24933, 29640] Cas6 Cas_csx3 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 24933-25979 bp Ori: ELR98430.1 Feature: domain Description: Cas6 Location: 24969-25695 bp Feature: domain Description: Cas6 Location: 24969-25695 bp Feature: gene Location: 26079-27329 bp Ori: ELR98431.1 Feature: domain Description: Cas_csx3 Location: 26514-26733 bp Feature: domain Description: Cas_csx3 Location: 2651 4-26733 bp Feature: gene Location: 27387-28304 bp Ori: ELR98432.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 27594-28200 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 27594-28200 bp Feature: gene Location: 28364-29365 bp Ori: ELR98433.1 Feature: domain Description: Cas1_I-II-III Location: 28373-29327 bp Feature: domain Description: Cas1 _I-II-III Location: 28373-29327 bp Feature: gene Location: 29365-29640 bp Ori: ELR98434.1 Feature: domain Description: Cas2_I_II_III Location: 29374-29599 bp Feature: domain Description: Cas2_I_II_III Location: 29374-29599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas6 (pfam09559), Cas_csx3 (pfam09620), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: ALVY01000225.1 Gloeocapsa sp. PCC 73106 scaffold_00225, whole genome shotgun sequence (86412 bp)
Overview 1 RT 1: 30228-36907 bp Neighborhood of RT #1 [30228, 36963] UbiH UbiH Glf RVT-GII GIIM McrA DUF563 LptC_YrbK LptC_YrbK LptC_YrbK Feature: gene Location: 30228-31598 bp Ori: ELR96545.1 Feature: domain Description: UbiH Location: 30249-30939 bp Feature: domain Description: UbiH Location: 302 49-30939 bp Feature: domain Description: UbiH Location: 31281-31518 bp Feature: domain Description: UbiH Location: 312 81-31518 bp Feature: gene Location: 31658-32770 bp Ori: ELR96546.1 Feature: domain Description: Glf Location: 31661-32759 bp Feature: domain Description: Glf Location: 31661-32 759 bp Feature: gene Location: 32904-34061 bp Ori: ELR96547.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32907-33471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 907-33471 bp Feature: domain Description: GIIM Note: maturase Location: 33531-33714 bp Feature: domain Description: GIIM Note: maturase Location: 33531-33714 bp Feature: domain Description: McrA Location: 33741-34029 bp Feature: domain Description: McrA Location: 33741-3402 9 bp Feature: gene Location: 34724-35752 bp Ori: ELR96548.1 Feature: domain Description: DUF563 Location: 35033-35612 bp Feature: domain Description: DUF563 Location: 35033-35612 bp Feature: gene Location: 35818-36963 bp Ori: ELR96549.1 Feature: domain Description: LptC_YrbK Location: 35860-36241 bp Feature: domain Description: LptC_YrbK Location: 35860-362 41 bp Feature: domain Description: LptC_YrbK Location: 36271-36559 bp Feature: domain Description: LptC_YrbK Location: 362 71-36559 bp Feature: domain Description: LptC_YrbK Location: 36577-36907 bp Feature: domain Description: LptC_YrbK Location: 36577-36907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UbiH (TIGR01984), Glf (COG0562), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF563 (pfam04577), LptC_YrbK (TIGR04409)

Seq: ALVY01000227.1 Gloeocapsa sp. PCC 73106 scaffold_00227, whole genome shotgun sequence (102152 bp)
Overview 1 RT 1: 36220-44935 bp Neighborhood of RT #1 [36220, 44967] precor6x_red PMT_2 RVT_N RVT-GII GIIM McrA P_ylase PRK07453 Feature: gene Location: 36220-36990 bp Ori: ELR96352.1 Feature: domain Description: precor6x_red Location: 36223-36979 bp Feature: domain Description: precor6x_red Location: 3 6223 -3 6979 bp Feature: gene Location: 36969-38348 bp Ori: ELR96353.1 Feature: domain Description: PMT_2 Location: 36978-37425 bp Feature: domain Description: PMT_2 Location: 3 6978-3 7425 bp Feature: gene Location: 38523-40202 bp Ori: ELR96354.1 Feature: domain Description: RVT_N Location: 38553-38796 bp Feature: domain Description: RVT_N Location: 3 8553 -3 8796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38841-39495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8841-3 9495 bp Feature: domain Description: GIIM Note: maturase Location: 39594-39828 bp Feature: domain Description: GIIM Note: maturase Location: 3 9594-3 9828 bp Feature: domain Description: McrA Location: 39927-40191 bp Feature: domain Description: McrA Location: 3 9927-40191 bp Feature: gene Location: 41180-43795 bp Ori: ELR96355.1 Feature: domain Description: P_ylase Location: 41360-43739 bp Feature: domain Description: P_ylase Location: 413 60-43 73 9 bp Feature: gene Location: 43972-44967 bp Ori: ELR96356.1 Feature: domain Description: PRK07453 Location: 43975-44935 bp Feature: domain Description: PRK07453 Location: 43 975-4493 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT precor6x_red (TIGR00715), PMT_2 (pfam13231), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), P_ylase (TIGR02093), PRK07453 (protochlorophyllide reductase)