myRT

myRT report for GCA_000332135.1_ASM33213v1

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Seq: KB235896.1 Anabaena sp. PCC 7108 genomic scaffold Ana7108scaffold_2, whole genome shotgun sequence (5714552 bp)
Overview 1 RT 1: 207513-211046 bp 2 RT 2: 1007310-1012479 bp 3 RT 3: 3621887-3628593 bp Neighborhood of RT #1 [207513, 211060] XisI XisH RVT-UG12 XisI XisH Neighborhood of RT #2 [1007310, 1012487] BetA MccV RVT_N RVT-GII GIIM HNHc PyrE Neighborhood of RT #3 [3621887, 3628616] STKc_PknB_like YfmG Avd_like RVT-DGRs PRK07373 InsQ Feature: gene Location: 207513-207842 bp Feature: domain Description: XisI Location: 207528-207837 bp Feature: domain Description: XisI Location: 207528-207837 bp Feature: gene Location: 207830-208246 bp Feature: domain Description: XisH Location: 207833-208232 bp Feature: domain Description: XisH Location: 207833-208232 bp Feature: gene Location: 208457-210208 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 208931-209387 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 208931 -209387 bp Feature: gene Location: 210327-210656 bp Feature: domain Description: XisI Location: 210342-210648 bp Feature: domain Description: XisI Location: 21 0342-21 0648 bp Feature: gene Location: 210644-211060 bp Feature: domain Description: XisH Location: 210647-211046 bp Feature: domain Description: XisH Location: 21 0647-21 1 046 bp Feature: gene Location: 1007310-1008884 bp Feature: domain Description: BetA Location: 1007316-1008873 bp Feature: domain Description: BetA Location: 1 00731 6-1 008873 bp Feature: gene Location: 1008942-1009385 bp Feature: domain Description: MccV Location: 1009098-1009311 bp Feature: domain Description: MccV Location: 1 009098-1 00931 1 bp Feature: gene Location: 1009470-1011152 bp Feature: domain Description: RVT_N Location: 1009512-1009758 bp Feature: domain Description: RVT_N Location: 1 00951 2-1 009758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009806-1010445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 009806-1 01 0445 bp Feature: domain Description: GIIM Note: maturase Location: 1010523-1010751 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 0523-1 01 0751 bp Feature: domain Description: HNHc Note: nucleases Location: 1010955-1011120 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 0955-1 01 1 1 20 bp Feature: gene Location: 1011674-1011862 bp Feature: gene Location: 1011870-1012487 bp Feature: domain Description: PyrE Location: 1011942-1012479 bp Feature: domain Description: PyrE Location: 1 01 1 942-1 01 2479 bp Feature: gene Location: 3621887-3623998 bp Feature: domain Description: STKc_PknB_like Location: 3621908-3622682 bp Feature: domain Description: STKc_PknB_like Location: 3621 908-3622682 bp Feature: domain Description: YfmG Location: 3623138-3623981 bp Feature: domain Description: YfmG Location: 36231 38-3623981 bp Feature: gene Location: 3624104-3624469 bp Feature: domain Description: Avd_like Location: 3624125-3624431 bp Feature: domain Description: Avd_like Location: 36241 25-3624431 bp Feature: gene Location: 3624551-3625618 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3624761-3625400 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3624761 -3625400 bp Feature: gene Location: 3626070-3627425 bp Feature: domain Description: PRK07373 Location: 3626073-3627420 bp Feature: domain Description: PRK07373 Location: 3626073-3627420 bp Feature: gene Location: 3627468-3628616 bp Feature: domain Description: InsQ Location: 3627474-3628593 bp Feature: domain Description: InsQ Location: 3627474-3628593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XisI (pfam08869), XisH (pfam08814), RVT-UG12, BetA (COG2303), MccV (pfam17508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PyrE (COG0461)
STKc_PknB_like (cd14014), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, PRK07373 (DNA polymerase III subunit alpha; Reviewed), InsQ (COG0675)