myRT

myRT report for GCA_000333295.1_ASM33329v1

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Seq: BACV01000918.1 Cytophagales str. B6 DNA, contig: IB006.C918, whole genome shotgun sequence (1898 bp)
Overview 1 RT 1: 2-1870 bp Neighborhood of RT #1 [2, 1896] RVT-GII GIIM DUF3467 Wza Feature: gene Location: 2-586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-1 34 bp Feature: domain Description: GIIM Note: maturase Location: 194-404 bp Feature: domain Description: GIIM Note: maturase Location: 1 94-404 bp Feature: gene Location: 938-1141 bp Feature: domain Description: DUF3467 Location: 944-1082 bp Feature: domain Description: DUF3467 Location: 944-1 082 bp Feature: gene Location: 1303-1896 bp Feature: domain Description: Wza Location: 1465-1870 bp Feature: domain Description: Wza Location: 1 465-1 870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3467 (pfam11950), Wza (COG1596)

Seq: BACV01000797.1 Cytophagales str. B6 DNA, contig: IB006.C797, whole genome shotgun sequence (11695 bp)
Overview 1 RT 1: 4373-10314 bp Neighborhood of RT #1 [4373, 10337] panB PRK12564 RVT-UG7 Cdd1 PAP2_haloperoxidase Feature: gene Location: 4373-5188 bp Feature: domain Description: panB Location: 4403-5186 bp Feature: domain Description: panB Location: 4403-5186 bp Feature: gene Location: 5606-6706 bp Feature: domain Description: PRK12564 Location: 5630-6701 bp Feature: domain Description: PRK12 564 Location: 5630-6701 bp Feature: gene Location: 6778-8379 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 7231-7639 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 72 31-7639 bp Feature: gene Location: 8394-8867 bp Feature: domain Description: Cdd1 Location: 8544-8793 bp Feature: domain Description: Cdd1 Location: 8544-8793 bp Feature: gene Location: 9015-10337 bp Feature: domain Description: PAP2_haloperoxidase Location: 9714-10314 bp Feature: domain Description: PAP2 _haloperoxidase Location: 9714-10314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT panB (TIGR00222), PRK12564 (carbamoyl-phosphate synthase small subunit), RVT-UG7, Cdd1 (pfam11731), PAP2_haloperoxidase (cd03398)

Seq: BACV01000778.1 Cytophagales str. B6 DNA, contig: IB006.C778, whole genome shotgun sequence (2611 bp)
Overview 1 RT 1: 2-2417 bp Neighborhood of RT #1 [2, 2417] RVT-GII GIIM yebU Feature: gene Location: 2-622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-170 bp Feature: domain Description: GIIM Note: maturase Location: 230-440 bp Feature: domain Description: GIIM Note: maturase Location: 23 0-440 bp Feature: gene Location: 713-2125 bp Feature: domain Description: yebU Location: 761-2090 bp Feature: domain Description: yebU Location: 761-2090 bp Feature: gene Location: 2223-2417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), yebU (PRK11933)

Seq: BACV01000334.1 Cytophagales str. B6 DNA, contig: IB006.C334, whole genome shotgun sequence (27062 bp)
Overview 1 RT 1: 6784-11744 bp Neighborhood of RT #1 [6784, 11749] PRK13014 PRK00222 RVT-GII GIIM def PqqL Feature: gene Location: 6784-7395 bp Feature: domain Description: PRK13014 Location: 6865-7390 bp Feature: domain Description: PRK13014 Location: 6865-7390 bp Feature: gene Location: 7395-7913 bp Feature: domain Description: PRK00222 Location: 7527-7899 bp Feature: domain Description: PRK00222 Location: 7527-7899 bp Feature: gene Location: 8562-9830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8760-9378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8760-9378 bp Feature: domain Description: GIIM Note: maturase Location: 9438-9648 bp Feature: domain Description: GIIM Note: maturase Location: 94 38-964 8 bp Feature: gene Location: 9927-10499 bp Feature: domain Description: def Location: 9936-10437 bp Feature: domain Description: def Location: 9936-104 37 bp Feature: gene Location: 10517-11749 bp Feature: domain Description: PqqL Location: 10526-11744 bp Feature: domain Description: PqqL Location: 10526-1174 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13014 (methionine sulfoxide reductase A; Provisional), PRK00222 (peptide-methionine (R)-S-oxide reductase MsrB), RVT-GII, GIIM (pfam08388), def (PRK00150), PqqL (COG0612)

Seq: BACV01000306.1 Cytophagales str. B6 DNA, contig: IB006.C306, whole genome shotgun sequence (12534 bp)
Overview 1 RT 1: 2341-6116 bp Neighborhood of RT #1 [2341, 6292] RVT-UG17 MBOAT_2 Feature: gene Location: 2341-3210 bp Feature: gene Location: 3328-3558 bp Feature: gene Location: 3579-4880 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3915-4515 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3915 -45 15 bp Feature: gene Location: 4904-5323 bp Feature: gene Location: 5327-6292 bp Feature: domain Description: MBOAT_2 Location: 5891-6116 bp Feature: domain Description: MBOAT_2 Location: 5 891-6116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, MBOAT_2 (pfam13813)

Seq: BACV01000304.1 Cytophagales str. B6 DNA, contig: IB006.C304, whole genome shotgun sequence (7624 bp)
Overview 1 RT 1: 1-2149 bp Neighborhood of RT #1 [1, 2178] RVT-GII GIIM SGNH_hydrolase_like_1 PRK14348 PRK14348 Feature: gene Location: 1-618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-16 6 bp Feature: domain Description: GIIM Note: maturase Location: 226-436 bp Feature: domain Description: GIIM Note: maturase Location: 226 -436 bp Feature: gene Location: 703-1422 bp Feature: domain Description: SGNH_hydrolase_like_1 Location: 835-1384 bp Feature: domain Description: SGNH_hydrolase_like_1 Location: 835-1384 bp Feature: gene Location: 1423-2178 bp Feature: domain Description: PRK14348 Location: 1438-1546 bp Feature: domain Description: PRK14348 Location: 1438-1546 bp Feature: domain Description: PRK14348 Location: 1618-2149 bp Feature: domain Description: PRK14348 Location: 16 18-2149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SGNH_hydrolase_like_1 (cd01832), PRK14348 (lipoyl(octanoyl) transferase LipB)

Seq: BACV01000187.1 Cytophagales str. B6 DNA, contig: IB006.C187, whole genome shotgun sequence (12773 bp)
Overview 1 RT 1: 2260-6336 bp Neighborhood of RT #1 [2260, 6467] Glyco_tranf_2_5 RVT-GII group_II_RT_mat DEDD_Tnp_IS110 Transposase_20 Feature: gene Location: 2260-2388 bp Feature: gene Location: 2389-3285 bp Feature: domain Description: Glyco_tranf_2_5 Location: 2398-3025 bp Feature: domain Description: Glyco_tranf_2_5 Location: 2398-3025 bp Feature: gene Location: 3925-4467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4123-4456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4123-4456 bp Feature: gene Location: 4634-5191 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4637-4985 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4637 -4985 bp Feature: gene Location: 5463-6467 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5484-5928 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5484-5928 bp Feature: domain Description: Transposase_20 Location: 6084-6336 bp Feature: domain Description: Transposase_20 Location: 6084-6336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_tranf_2_5 (pfam13712), RVT-GII, group_II_RT_mat (TIGR04416), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371)