myRT

myRT report for GCA_000340275.1_SEPT362

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Seq: AOGL01000081.1 Escherichia coli SEPT362 contig81, whole genome shotgun sequence (15698 bp)
Overview 1 RT 1: 8916-14758 bp Neighborhood of RT #1 [8916, 14793] DUF5339 Asparaginase_2 RVT-GII DcuC PRK13381 Feature: gene Location: 8916-9194 bp Ori: EMD05270.1 Feature: domain Description: DUF5339 Location: 8979-9180 bp Feature: domain Description: DUF5339 Location: 8979-91 80 bp Feature: gene Location: 9532-10563 bp Ori: EMD05271.1 Feature: domain Description: Asparaginase_2 Location: 9622-10555 bp Feature: domain Description: Asparaginase_2 Location: 9622-1 0555 bp Feature: gene Location: 11087-11533 bp Ori: EMD05272.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11393-11495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 393-1 1 495 bp Feature: gene Location: 12179-13540 bp Ori: EMD05273.1 Feature: domain Description: DcuC Location: 12182-13514 bp Feature: domain Description: DcuC Location: 1 21 82-1 351 4 bp Feature: gene Location: 13537-14793 bp Ori: EMD05274.1 Feature: domain Description: PRK13381 Location: 13543-14758 bp Feature: domain Description: PRK1 3381 Location: 1 3543-1 4758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5339 (pfam17274), Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771), PRK13381 (peptidase T; Provisional)

Seq: AOGL01000088.1 Escherichia coli SEPT362 contig88, whole genome shotgun sequence (7191 bp)
Overview 1 RT 1: 1784-6292 bp Neighborhood of RT #1 [1784, 6537] HsdM PHA02517 RVT-GII GIIM Feature: gene Location: 1784-4207 bp Ori: EMD04584.1 Feature: domain Description: HsdM Location: 1805-3749 bp Feature: domain Description: HsdM Location: 1805-3749 bp Feature: gene Location: 4466-4819 bp Ori: EMD04585.1 Feature: domain Description: PHA02517 Location: 4469-4814 bp Feature: domain Description: PHA02 517 Location: 4469-4814 bp Feature: gene Location: 5014-6537 bp Ori: EMD04586.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5287-6019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 87-6019 bp Feature: domain Description: GIIM Note: maturase Location: 6094-6292 bp Feature: domain Description: GIIM Note: maturase Location: 6094-62 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)