myRT

myRT report for GCA_000340985.1_genetic_mechanisms_of_environmental_adaptability

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Seq: ANAZ01000002.1 Nocardiopsis valliformis DSM 45023 contig_2, whole genome shotgun sequence (462288 bp)
Overview 1 RT 1: 18317-24210 bp Neighborhood of RT #1 [18317, 24314] INT_ICEBs1_C_like COG3464 COG3464 RVT-GII GIIM DDE_Tnp_1_assoc DDE_Tnp_1 Feature: gene Location: 18317-19066 bp Feature: domain Description: INT_ICEBs1_C_like Location: 18530-18992 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 8530-1 8992 bp Feature: gene Location: 19118-20728 bp Feature: domain Description: COG3464 Location: 19250-19886 bp Feature: domain Description: COG3464 Location: 1 9250-1 9886 bp Feature: domain Description: COG3464 Location: 20390-20726 bp Feature: domain Description: COG3464 Location: 20390-20726 bp Feature: gene Location: 21125-22594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21464-22145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 464-221 45 bp Feature: domain Description: GIIM Note: maturase Location: 22214-22451 bp Feature: domain Description: GIIM Note: maturase Location: 2221 4-22451 bp Feature: gene Location: 22720-22905 bp Feature: gene Location: 23253-24314 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 23298-23523 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 23298-23523 bp Feature: domain Description: DDE_Tnp_1 Location: 23544-24210 bp Feature: domain Description: DDE_Tnp_1 Location: 23544-2421 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG3464 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609)

Seq: ANAZ01000008.1 Nocardiopsis valliformis DSM 45023 contig_8, whole genome shotgun sequence (420543 bp)
Overview 1 RT 1: 241196-247669 bp Neighborhood of RT #1 [241196, 247890] InsQ RVT-GII adh_short_C2 Methyltransf_25 Feature: gene Location: 241196-241963 bp Feature: gene Location: 242870-244147 bp Feature: domain Description: InsQ Location: 242876-244013 bp Feature: domain Description: InsQ Location: 2 42 876-2 44013 bp Feature: gene Location: 245004-245228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245046-245220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 45046-2 452 2 0 bp Feature: gene Location: 246762-247115 bp Feature: domain Description: adh_short_C2 Location: 246789-247104 bp Feature: domain Description: adh_short_C2 Location: 2 46789-2 47104 bp Feature: gene Location: 247141-247890 bp Feature: domain Description: Methyltransf_25 Location: 247387-247669 bp Feature: domain Description: Methyltransf_2 5 Location: 2 47387-2 47669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, adh_short_C2 (pfam13561), Methyltransf_25 (pfam13649)

Seq: ANAZ01000073.1 Nocardiopsis valliformis DSM 45023 contig_73, whole genome shotgun sequence (2157 bp)
Overview 1 RT 1: 2-1884 bp Neighborhood of RT #1 [2, 2027] RVT-GII GIIM Feature: gene Location: 2-187 bp Feature: gene Location: 226-387 bp Feature: gene Location: 630-2027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 909-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 909-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1665-1884 bp Feature: domain Description: GIIM Note: maturase Location: 1665-1884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)