myRT

myRT report for GCA_000341635.1_MH23v1

Download annotations/find similar RTs

Seq: AOGP01000064.1 Mannheimia haemolytica serotype 6 str. H23 Cont6, whole genome shotgun sequence (117023 bp)
Overview 1 RT 1: 63426-69194 bp Neighborhood of RT #1 [63426, 69196] YaaA RVT_N RVT-GII rpsI rplM Feature: gene Location: 63426-63989 bp Feature: gene Location: 63989-64765 bp Ori: EME03048.1 Feature: domain Description: YaaA Location: 63992-64760 bp Feature: domain Description: YaaA Location: 63992-64760 bp Feature: gene Location: 66144-66716 bp Ori: EME03049.1 Feature: domain Description: RVT_N Location: 66255-66498 bp Feature: domain Description: RVT_N Location: 66255-66498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66543-66711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66543-6671 1 bp Feature: gene Location: 68356-68751 bp Ori: EME03050.1 Gene: rpsI Feature: domain Description: rpsI Location: 68368-68749 bp Feature: domain Description: rpsI Location: 68368-68749 bp Feature: gene Location: 68768-69196 bp Ori: EME03051.1 Gene: rplM Feature: domain Description: rplM Location: 68771-69194 bp Feature: domain Description: rplM Location: 68771 -691 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216)

Seq: AOGP01000060.1 Mannheimia haemolytica serotype 6 str. H23 Cont41, whole genome shotgun sequence (101714 bp)
Overview 1 RT 1: 9100-18089 bp Neighborhood of RT #1 [9100, 18089] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 9100-10164 bp Ori: EME03436.1 Feature: domain Description: ECA_wecA Location: 9112-10129 bp Feature: domain Description: ECA_wecA Location: 9112 -1012 9 bp Feature: gene Location: 10306-11586 bp Ori: EME03437.1 Feature: domain Description: PRK00062 Location: 10312-11581 bp Feature: domain Description: PRK00062 Location: 10312 -11581 bp Feature: gene Location: 11838-13148 bp Ori: EME03438.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12033-12852 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12 033-12 852 bp Feature: gene Location: 13543-17826 bp Ori: EME03439.1 Feature: domain Description: PRK00566 Location: 13579-17668 bp Feature: domain Description: PRK00566 Location: 13579-17668 bp Feature: gene Location: 17898-18089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)