myRT

myRT report for GCA_000343875.1_ASM34387v1

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Seq: CAOL01000472.1 Mycobacterium canettii CIPT 140070002 WGS project CAOL00000000 data, isolate STB-E, contig 472, whole genome shotgun sequence (19572 bp)
Overview 1 RT 1: 13982-19569 bp Neighborhood of RT #1 [13982, 19571] sdhA sdhB RVT-GII GIIM rve Feature: gene Location: 13982-15754 bp Feature: domain Description: sdhA Location: 13991-15752 bp Feature: domain Description: sdhA Location: 1 3991 -1 5752 bp Feature: gene Location: 15754-16545 bp Feature: domain Description: sdhB Location: 15832-16537 bp Feature: domain Description: sdhB Location: 1 5832-1 6537 bp Feature: gene Location: 16644-17906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16860-17520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6860-1 7520 bp Feature: domain Description: GIIM Note: maturase Location: 17601-17832 bp Feature: domain Description: GIIM Note: maturase Location: 1 7601 -1 7832 bp Feature: gene Location: 17565-18731 bp Feature: gene Location: 18894-19571 bp Feature: domain Description: rve Location: 19257-19569 bp Feature: domain Description: rve Location: 1 9257-1 9569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sdhA, sdhB, RVT-GII, GIIM (pfam08388), rve (pfam00665)

Seq: CAOL01000007.1 Mycobacterium canettii CIPT 140070002 WGS project CAOL00000000 data, isolate STB-E, contig 7, whole genome shotgun sequence (711 bp)
Overview 1 RT 1: 1-496 bp Neighborhood of RT #1 [1, 678] RVT-GII Feature: gene Location: 1-678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184-496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184-496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII