myRT

myRT report for GCA_000344615.1_ASM34461v1

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Seq: KB467824.1 Janthinobacterium sp. CG3 genomic scaffold JANGC3DRAFT_scaffold1.1, whole genome shotgun sequence (5549265 bp)
Overview 1 RT 1: 1832732-1836729 bp Neighborhood of RT #1 [1832732, 1836729] Tra5 HTH_Tnp_1 RVT-GII GIIM SRPBCC_CalC_Aha1-like Feature: gene Location: 1832732-1833673 bp Feature: domain Description: Tra5 Location: 1832930-1833503 bp Feature: domain Description: Tra5 Location: 1 832930-1 833503 bp Feature: gene Location: 1833705-1834055 bp Feature: domain Description: HTH_Tnp_1 Location: 1833708-1833972 bp Feature: domain Description: HTH_Tnp_1 Location: 1 833708-1 833972 bp Feature: gene Location: 1834274-1835557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1834523-1835138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 834523-1 8351 38 bp Feature: domain Description: GIIM Note: maturase Location: 1835195-1835399 bp Feature: domain Description: GIIM Note: maturase Location: 1 8351 95-1 835399 bp Feature: gene Location: 1835723-1836226 bp Feature: domain Description: SRPBCC_CalC_Aha1-like Location: 1835753-1836218 bp Feature: domain Description: SRPBCC_CalC_Aha1 -like Location: 1 835753-1 83621 8 bp Feature: gene Location: 1836346-1836729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388), SRPBCC_CalC_Aha1-like (cd07814)

Seq: KB467825.1 Janthinobacterium sp. CG3 genomic scaffold JANGC3DRAFT_scaffold2.2, whole genome shotgun sequence (572308 bp)
Overview 1 RT 1: 531816-537039 bp Neighborhood of RT #1 [531816, 537089] HDOD RVT-GII GIIM secF Feature: gene Location: 531816-532100 bp Feature: gene Location: 533061-533897 bp Feature: domain Description: HDOD Location: 533127-533553 bp Feature: domain Description: HDOD Location: 53312 7-533553 bp Feature: gene Location: 534099-535106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534102-534687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534102 -534687 bp Feature: domain Description: GIIM Note: maturase Location: 534744-534948 bp Feature: domain Description: GIIM Note: maturase Location: 534744-534948 bp Feature: gene Location: 535011-535430 bp Feature: gene Location: 536067-537089 bp Feature: domain Description: secF Location: 536088-537039 bp Feature: domain Description: secF Location: 536088-537039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HDOD (pfam08668), RVT-GII, GIIM (pfam08388), secF (PRK13022)