myRT

myRT report for GCA_000348945.1_ArGa1

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Seq: AOCK01000003.1 Paeniglutamicibacter gangotriensis Lz1y contig000003, whole genome shotgun sequence (481348 bp)
Overview 1 RT 1: 153118-159519 bp Neighborhood of RT #1 [153118, 159575] nifR3_yhdG RVT-Retrons SsuD zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 153118-154314 bp Feature: domain Description: nifR3_yhdG Location: 153196-154153 bp Feature: domain Description: nifR3_yhdG Location: 1 531 96-1 541 53 bp Feature: gene Location: 154604-154753 bp Feature: gene Location: 154886-156271 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 155420-156044 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 55420-1 56044 bp Feature: gene Location: 156763-157782 bp Feature: domain Description: SsuD Location: 156829-157750 bp Feature: domain Description: SsuD Location: 1 56829-1 57750 bp Feature: gene Location: 158331-159575 bp Feature: domain Description: zf-ISL3 Location: 158457-158592 bp Feature: domain Description: zf-ISL3 Location: 1 58457-1 58592 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 158610-158757 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1 5861 0-1 58757 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 158802-159519 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 58802-1 5951 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nifR3_yhdG (TIGR00737), RVT-Retrons, SsuD (COG2141), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)

Seq: AOCK01000005.1 Paeniglutamicibacter gangotriensis Lz1y contig000005, whole genome shotgun sequence (339447 bp)
Overview 1 RT 1: 193222-200012 bp Neighborhood of RT #1 [193222, 200065] PRK00555 RVT-GII GIIM InsQ AcrR Feature: gene Location: 193222-194382 bp Feature: domain Description: PRK00555 Location: 193297-194377 bp Feature: domain Description: PRK00555 Location: 1932 97-194377 bp Feature: gene Location: 194658-195080 bp Feature: gene Location: 195168-196487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195420-196035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19542 0-196035 bp Feature: domain Description: GIIM Note: maturase Location: 196092-196296 bp Feature: domain Description: GIIM Note: maturase Location: 196092 -1962 96 bp Feature: gene Location: 197354-198829 bp Feature: domain Description: InsQ Location: 198077-198668 bp Feature: domain Description: InsQ Location: 198077-198668 bp Feature: gene Location: 199457-200065 bp Feature: domain Description: AcrR Location: 199490-200012 bp Feature: domain Description: AcrR Location: 199490-2 00012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00555 (galactokinase; Provisional), RVT-GII, GIIM (pfam08388), InsQ (COG0675), AcrR (COG1309)