myRT

myRT report for GCA_000350025.2_C48_93_IrSpV01

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Seq: AHAX01000046.1 Escherichia coli ONT:H33 str. C48/93 NODE_45, whole genome shotgun sequence (35391 bp)
Overview 1 RT 1: 3182-15391 bp Neighborhood of RT #1 [3182, 17772] IS285 Peptidase_S6 autotrans_barl RVT-GII GIIM VI_ClpV1 ImcF-related_N Feature: gene Location: 3182-3400 bp Feature: domain Description: IS285 Location: 3185-3389 bp Feature: domain Description: IS285 Location: 31 85-3389 bp Feature: gene Location: 3551-7669 bp Feature: domain Description: Peptidase_S6 Location: 3704-5876 bp Feature: domain Description: Peptidase_S6 Location: 3704-5876 bp Feature: domain Description: autotrans_barl Location: 6440-7667 bp Feature: domain Description: autotrans_barl Location: 6440-7667 bp Feature: gene Location: 8700-10223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8973-9705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8973-9705 bp Feature: domain Description: GIIM Note: maturase Location: 9780-9978 bp Feature: domain Description: GIIM Note: maturase Location: 9780-9978 bp Feature: gene Location: 11815-14364 bp Feature: domain Description: VI_ClpV1 Location: 11851-14311 bp Feature: domain Description: VI_ClpV1 Location: 1 1 851 -1 431 1 bp Feature: gene Location: 14368-17772 bp Feature: domain Description: ImcF-related_N Location: 14890-15391 bp Feature: domain Description: ImcF-related_N Location: 1 4890-1 5391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VI_ClpV1 (TIGR03345), IS285 (COG3328), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), RVT-GII, GIIM (pfam08388)

Seq: AHAX01000006.1 Escherichia coli ONT:H33 str. C48/93 NODE_9, whole genome shotgun sequence (39454 bp)
Overview 1 RT 1: 16195-24751 bp Neighborhood of RT #1 [16195, 24762] proB proA RVT-Retrons TIGR02646 PRK13877 Feature: gene Location: 16195-17298 bp Feature: domain Description: proB Location: 16210-17290 bp Feature: domain Description: proB Location: 162 10-172 90 bp Feature: gene Location: 17310-18563 bp Feature: domain Description: proA Location: 17337-18528 bp Feature: domain Description: proA Location: 17337-1852 8 bp Feature: gene Location: 19205-20143 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19304-19901 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19304-19901 bp Feature: gene Location: 21756-22532 bp Feature: domain Description: TIGR02646 Location: 21828-22356 bp Feature: domain Description: TIGR02 646 Location: 2 182 8-2 2 356 bp Feature: gene Location: 24403-24762 bp Feature: domain Description: PRK13877 Location: 24421-24751 bp Feature: domain Description: PRK13877 Location: 2 442 1-2 4751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proB (TIGR01027), proA (TIGR00407), RVT-Retrons, TIGR02646 (TIGR02646 family protein), PRK13877 (conjugal transfer transcriptional regulator TraJ)