myRT

myRT report for GCA_000350485.1_C.termitidis_454_shotgun_Newbler

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Seq: AORV01000040.1 Ruminiclostridium cellobioparum subsp. termitidis CT1112 Ct_contig00043, whole genome shotgun sequence (79722 bp)
Overview 1 RT 1: 56078-60112 bp Neighborhood of RT #1 [56078, 61134] BioC RVT-Retrons COG4637 COG4637 Feature: gene Location: 56078-56785 bp Ori: EMS71260.1 Feature: domain Description: BioC Location: 56183-56555 bp Feature: domain Description: BioC Location: 561 83-56555 bp Feature: gene Location: 56775-57413 bp Feature: gene Location: 57860-58714 bp Ori: EMS71283.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57866-58337 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57866-58337 bp Feature: gene Location: 58750-58896 bp Feature: gene Location: 59119-61134 bp Ori: EMS71253.1 Feature: domain Description: COG4637 Location: 59125-59254 bp Feature: domain Description: COG4637 Location: 591 25-59254 bp Feature: domain Description: COG4637 Location: 59836-60112 bp Feature: domain Description: COG4637 Location: 59836-601 1 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BioC (TIGR02072), RVT-Retrons, COG4637 (Predicted ATPase )

Seq: AORV01000026.1 Ruminiclostridium cellobioparum subsp. termitidis CT1112 Ct_contig00029, whole genome shotgun sequence (416826 bp)
Overview 1 RT 1: 354846-361516 bp Neighborhood of RT #1 [354846, 361516] HTH_31 RVT-UG15 Feature: gene Location: 354846-355115 bp Feature: gene Location: 355233-355478 bp Ori: EMS72815.1 Feature: domain Description: HTH_31 Location: 355266-355440 bp Feature: domain Description: HTH_31 Location: 3552 66-355440 bp Feature: gene Location: 356806-358338 bp Ori: EMS72605.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 357247-357676 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 3572 47-357676 bp Feature: gene Location: 358677-360644 bp Feature: gene Location: 360659-361516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_31 (pfam13560), RVT-UG15