myRT

myRT report for GCA_000350565.1_P.ver1YdBTEX2v.1

Download annotations/find similar RTs

Seq: AOUH01000022.1 Pseudomonas veronii 1YdBTEX2 Contig22, whole genome shotgun sequence (279483 bp)
Overview 1 RT 1: 194886-199776 bp Neighborhood of RT #1 [194886, 199776] Avd_like RVT-DGRs Dcm Feature: gene Location: 194886-195242 bp Feature: domain Description: Avd_like Location: 194913-195222 bp Feature: domain Description: Avd_like Location: 1 9491 3-1 95222 bp Feature: gene Location: 195263-195400 bp Feature: gene Location: 195454-196614 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 195706-196462 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 95706-1 96462 bp Feature: gene Location: 196683-198476 bp Feature: domain Description: Dcm Location: 196710-198369 bp Feature: domain Description: Dcm Location: 1 9671 0-1 98369 bp Feature: gene Location: 199471-199776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Dcm (COG0270)

Seq: AOUH01000041.1 Pseudomonas veronii 1YdBTEX2 Contig41, whole genome shotgun sequence (48450 bp)
Overview 1 RT 1: 1574-6305 bp Neighborhood of RT #1 [1574, 6355] Resolvase Recombinase Zn_ribbon_recom RVT-GII COG3547 Feature: gene Location: 1574-1759 bp Feature: gene Location: 2299-4191 bp Feature: domain Description: Resolvase Location: 2320-2758 bp Feature: domain Description: Resolvase Location: 2 32 0-2 758 bp Feature: domain Description: Recombinase Location: 2854-3211 bp Feature: domain Description: Recombinase Location: 2 854-32 11 bp Feature: domain Description: Zn_ribbon_recom Location: 3253-3457 bp Feature: domain Description: Zn_ribbon_recom Location: 32 53-3457 bp Feature: gene Location: 4511-4873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4517-4748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4517-4748 bp Feature: gene Location: 5027-5284 bp Feature: gene Location: 5327-6355 bp Feature: domain Description: COG3547 Location: 5339-6305 bp Feature: domain Description: COG3547 Location: 5339-6305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, COG3547 (Transposase )