myRT

myRT report for GCA_000350925.1_Esch_coli_KTE181_V1

Download annotations/find similar RTs

Seq: KB732402.1 Escherichia coli KTE181 genomic scaffold acEnE-supercont1.3, whole genome shotgun sequence (2081 bp)
Overview 1 RT 1: 659-1823 bp Neighborhood of RT #1 [659, 1909] RVT-GII GIIM Feature: gene Location: 659-1909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863-1520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863-1 520 bp Feature: domain Description: GIIM Note: maturase Location: 1601-1823 bp Feature: domain Description: GIIM Note: maturase Location: 1 601 -1 823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KB732403.1 Escherichia coli KTE181 genomic scaffold acEnE-supercont1.4, whole genome shotgun sequence (1711764 bp)
Overview 1 RT 1: 1009439-1017091 bp Neighborhood of RT #1 [1009439, 1017091] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 1009439-1010458 bp Feature: domain Description: DUF4917 Location: 1009499-1010423 bp Feature: domain Description: DUF4917 Location: 1009499-101042 3 bp Feature: gene Location: 1011857-1014103 bp Feature: domain Description: AAA_15 Location: 1011860-1012868 bp Feature: domain Description: AAA_15 Location: 1011860-1012 868 bp Feature: gene Location: 1014218-1015318 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1014401-1014929 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1014401-101492 9 bp Feature: gene Location: 1015974-1016843 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1016496-1016667 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1016496-1016667 bp Feature: gene Location: 1016840-1017091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)