myRT

myRT report for GCA_000351045.1_Esch_coli_KTE201_V1

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Seq: KB732476.1 Escherichia coli KTE201 genomic scaffold acEnH-supercont1.2, whole genome shotgun sequence (112619 bp)
Overview 1 RT 1: 3-3379 bp 2 RT 2: 95578-100095 bp Neighborhood of RT #1 [3, 3381] PHA02517 RVT-GII GIIM PHA02517 PRK09413 Neighborhood of RT #2 [95578, 100829] autotrans_barl PHA02517 RVT-GII GIIM PHA02517 rve Feature: gene Location: 3-248 bp Feature: domain Description: PHA02517 Location: 6-183 bp Feature: domain Description: PHA0251 7 Location: 6-1 83 bp Feature: gene Location: 840-2363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1113-1845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 3-1 845 bp Feature: domain Description: GIIM Note: maturase Location: 1920-2118 bp Feature: domain Description: GIIM Note: maturase Location: 1 920-21 1 8 bp Feature: gene Location: 2480-2926 bp Feature: domain Description: PHA02517 Location: 2483-2924 bp Feature: domain Description: PHA0251 7 Location: 2483-2924 bp Feature: gene Location: 3016-3381 bp Feature: domain Description: PRK09413 Location: 3019-3379 bp Feature: domain Description: PRK0941 3 Location: 301 9-3379 bp Feature: gene Location: 95578-96147 bp Feature: domain Description: autotrans_barl Location: 95659-96094 bp Feature: domain Description: autotrans_barl Location: 95659-96094 bp Feature: gene Location: 96150-96596 bp Feature: domain Description: PHA02517 Location: 96153-96594 bp Feature: domain Description: PHA0251 7 Location: 961 53-96594 bp Feature: gene Location: 96713-98236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96986-97718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96986-9771 8 bp Feature: domain Description: GIIM Note: maturase Location: 97793-97991 bp Feature: domain Description: GIIM Note: maturase Location: 97793-97991 bp Feature: gene Location: 98828-99109 bp Feature: domain Description: PHA02517 Location: 98831-99044 bp Feature: domain Description: PHA0251 7 Location: 98831 -99044 bp Feature: gene Location: 99330-100829 bp Feature: domain Description: rve Location: 99702-100095 bp Feature: domain Description: rve Location: 99702-1 00095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), autotrans_barl (TIGR01414), rve (pfam00665)