myRT

myRT report for GCA_000351345.1_Esch_coli_KTE234_V1

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Seq: KB732598.1 Escherichia coli KTE234 genomic scaffold acEnk-supercont1.1, whole genome shotgun sequence (4229601 bp)
Overview 1 RT 1: 433184-438491 bp 2 RT 2: 992329-998050 bp 3 RT 3: 2283899-2290676 bp Neighborhood of RT #1 [433184, 438502] COG3547 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [992329, 998085] IS285 PHA02517 RVT-GII GIIM PHA02517 mhpA Neighborhood of RT #3 [2283899, 2290855] SSL2 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 433184-433528 bp Feature: gene Location: 434018-435094 bp Feature: domain Description: COG3547 Location: 434057-434978 bp Feature: domain Description: COG3547 Location: 434057-434978 bp Feature: gene Location: 435636-437159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 435909-436641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 435909-436641 bp Feature: domain Description: GIIM Note: maturase Location: 436716-436914 bp Feature: domain Description: GIIM Note: maturase Location: 43671 6-43691 4 bp Feature: gene Location: 437751-438176 bp Feature: domain Description: PHA02517 Location: 437772-438111 bp Feature: domain Description: PHA0251 7 Location: 437772-4381 1 1 bp Feature: gene Location: 438218-438502 bp Feature: domain Description: InsE Location: 438233-438491 bp Feature: domain Description: InsE Location: 438233-438491 bp Feature: gene Location: 992329-993627 bp Feature: domain Description: IS285 Location: 992359-993517 bp Feature: domain Description: IS285 Location: 992359-99351 7 bp Feature: gene Location: 993525-993899 bp Feature: domain Description: PHA02517 Location: 993528-993888 bp Feature: domain Description: PHA0251 7 Location: 993528-993888 bp Feature: gene Location: 994094-995617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994367-995099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994367-995099 bp Feature: domain Description: GIIM Note: maturase Location: 995174-995372 bp Feature: domain Description: GIIM Note: maturase Location: 9951 74-995372 bp Feature: gene Location: 996209-996448 bp Feature: domain Description: PHA02517 Location: 996212-996383 bp Feature: domain Description: PHA0251 7 Location: 99621 2-996383 bp Feature: gene Location: 996724-998085 bp Feature: domain Description: mhpA Location: 996730-998050 bp Feature: domain Description: mhpA Location: 996730-998050 bp Feature: gene Location: 2283899-2286889 bp Feature: domain Description: SSL2 Location: 2284055-2285033 bp Feature: domain Description: SSL2 Location: 2284055-2285033 bp Feature: gene Location: 2286785-2287060 bp Feature: gene Location: 2287618-2288553 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2287720-2288320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2287720-2288320 bp Feature: gene Location: 2288550-2290202 bp Feature: domain Description: COG3950 Location: 2288748-2290164 bp Feature: domain Description: COG3950 Location: 2288748-22901 64 bp Feature: gene Location: 2290205-2290855 bp Feature: domain Description: TIGR02646 Location: 2290271-2290676 bp Feature: domain Description: TIGR02646 Location: 2290271 -2290676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), IS285 (COG3328), mhpA (PRK06183), SSL2 (COG1061), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )
TIGR02646 (TIGR02646 family protein)