myRT

myRT report for GCA_000351385.1_Esch_coli_KTE236_V1

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Seq: KB732622.1 Escherichia coli KTE236 genomic scaffold acEuS-supercont1.2, whole genome shotgun sequence (626234 bp)
Overview 1 RT 1: 68770-74801 bp Neighborhood of RT #1 [68770, 74938] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 68770-68910 bp Ori: ELD85223.1 Feature: domain Description: SfsB Location: 68779-68851 bp Feature: domain Description: SfsB Location: 68779-68851 bp Feature: gene Location: 68907-69377 bp Feature: gene Location: 69724-72933 bp Ori: ELD85225.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 70252-70741 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 70252-70741 bp Feature: domain Description: nitrilase Location: 72247-72844 bp Feature: domain Description: nitrilase Location: 72247-72844 bp Feature: gene Location: 73249-74031 bp Ori: ELD85226.1 Feature: domain Description: AbiEi_3_N Location: 73261-73522 bp Feature: domain Description: AbiEi_3_N Location: 73261 -73522 bp Feature: domain Description: AbiEi_3 Location: 73534-73990 bp Feature: domain Description: AbiEi_3 Location: 73534-73990 bp Feature: gene Location: 74018-74938 bp Ori: ELD85227.1 Feature: domain Description: AbiEii Location: 74060-74801 bp Feature: domain Description: AbiEii Location: 74060-74801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: KB732628.1 Escherichia coli KTE236 genomic scaffold acEuS-supercont1.8, whole genome shotgun sequence (622016 bp)
Overview 1 RT 1: 447187-450672 bp Neighborhood of RT #1 [447187, 450674] InsE PHA02517 RVT-GII GIIM PHA02517 PHA02517 Feature: gene Location: 447187-447513 bp Ori: ELD79293.1 Feature: domain Description: InsE Location: 447190-447511 bp Feature: domain Description: InsE Location: 447190-447511 bp Feature: gene Location: 447513-447992 bp Ori: ELD79294.1 Feature: domain Description: PHA02517 Location: 447573-447927 bp Feature: domain Description: PHA02 517 Location: 447573-44792 7 bp Feature: gene Location: 448584-450107 bp Ori: ELD79295.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448857-449589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448857-449589 bp Feature: domain Description: GIIM Note: maturase Location: 449664-449862 bp Feature: domain Description: GIIM Note: maturase Location: 449664-449862 bp Feature: gene Location: 450224-450517 bp Ori: ELD79296.1 Feature: domain Description: PHA02517 Location: 450227-450500 bp Feature: domain Description: PHA02 517 Location: 4502 2 7-450500 bp Feature: gene Location: 450480-450674 bp Ori: ELD79297.1 Feature: domain Description: PHA02517 Location: 450498-450672 bp Feature: domain Description: PHA02 517 Location: 450498-450672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: KB732613.1 Escherichia coli KTE236 genomic scaffold acEuS-supercont1.1, whole genome shotgun sequence (140510 bp)
Overview 1 RT 1: 681-3462 bp Neighborhood of RT #1 [681, 3467] RVT-GII GIIM Tra5 InsE Feature: gene Location: 681-2204 bp Ori: ELD86067.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1686 bp Feature: domain Description: GIIM Note: maturase Location: 1764-1959 bp Feature: domain Description: GIIM Note: maturase Location: 1764-1959 bp Feature: gene Location: 2524-3171 bp Ori: ELD86068.1 Feature: domain Description: Tra5 Location: 2635-3145 bp Feature: domain Description: Tra5 Location: 263 5-3 145 bp Feature: gene Location: 3168-3467 bp Ori: ELD86069.1 Feature: domain Description: InsE Location: 3195-3462 bp Feature: domain Description: InsE Location: 3 195-3 462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801), InsE (COG2963)