myRT

myRT report for GCA_000351405.1_Esch_coli_KTE237_V1

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Seq: KB733378.1 Escherichia coli KTE237 genomic scaffold acEoe-supercont1.1, whole genome shotgun sequence (1036854 bp)
Overview 1 RT 1: 497041-503072 bp Neighborhood of RT #1 [497041, 503209] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 497041-497181 bp Ori: ELD91575.1 Feature: domain Description: SfsB Location: 497050-497122 bp Feature: domain Description: SfsB Location: 497050-4971 22 bp Feature: gene Location: 497178-497648 bp Feature: gene Location: 497995-501204 bp Ori: ELD91577.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 498523-499012 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 498523-49901 2 bp Feature: domain Description: nitrilase Location: 500518-501115 bp Feature: domain Description: nitrilase Location: 50051 8-501 1 1 5 bp Feature: gene Location: 501520-502302 bp Ori: ELD91578.1 Feature: domain Description: AbiEi_3_N Location: 501532-501793 bp Feature: domain Description: AbiEi_3_N Location: 501 532-501 793 bp Feature: domain Description: AbiEi_3 Location: 501805-502261 bp Feature: domain Description: AbiEi_3 Location: 501 805-502261 bp Feature: gene Location: 502289-503209 bp Ori: ELD91579.1 Feature: domain Description: AbiEii Location: 502331-503072 bp Feature: domain Description: AbiEii Location: 502331 -503072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: KB733385.1 Escherichia coli KTE237 genomic scaffold acEoe-supercont1.7, whole genome shotgun sequence (2980973 bp)
Overview 1 RT 1: 2183772-2187257 bp Neighborhood of RT #1 [2183772, 2187259] InsE PHA02517 RVT-GII GIIM PHA02517 PHA02517 Feature: gene Location: 2183772-2184098 bp Ori: ELD83790.1 Feature: domain Description: InsE Location: 2183775-2184096 bp Feature: domain Description: InsE Location: 2 183775-2 184096 bp Feature: gene Location: 2184098-2184577 bp Ori: ELD83791.1 Feature: domain Description: PHA02517 Location: 2184158-2184512 bp Feature: domain Description: PHA02 517 Location: 2 184158-2 184512 bp Feature: gene Location: 2185169-2186692 bp Ori: ELD83792.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2185442-2186174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 185442 -2 186174 bp Feature: domain Description: GIIM Note: maturase Location: 2186252-2186447 bp Feature: domain Description: GIIM Note: maturase Location: 2 1862 52 -2 186447 bp Feature: gene Location: 2186809-2187102 bp Ori: ELD83793.1 Feature: domain Description: PHA02517 Location: 2186812-2187085 bp Feature: domain Description: PHA02 517 Location: 2 186812 -2 187085 bp Feature: gene Location: 2187065-2187259 bp Ori: ELD83794.1 Feature: domain Description: PHA02517 Location: 2187083-2187257 bp Feature: domain Description: PHA02 517 Location: 2 187083-2 1872 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: KB733380.1 Escherichia coli KTE237 genomic scaffold acEoe-supercont1.2, whole genome shotgun sequence (141131 bp)
Overview 1 RT 1: 11089-17215 bp Neighborhood of RT #1 [11089, 17220] PRK08181 rve RVT-GII GIIM Tra5 InsE Feature: gene Location: 11089-11844 bp Ori: ELD90636.1 Feature: domain Description: PRK08181 Location: 11113-11824 bp Feature: domain Description: PRK08181 Location: 11113 -11824 bp Feature: gene Location: 11841-13340 bp Ori: ELD90637.1 Feature: domain Description: rve Location: 12213-12606 bp Feature: domain Description: rve Location: 12213 -12606 bp Feature: gene Location: 14434-15957 bp Ori: ELD90638.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14707-15439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14707-1543 9 bp Feature: domain Description: GIIM Note: maturase Location: 15514-15712 bp Feature: domain Description: GIIM Note: maturase Location: 15514-15712 bp Feature: gene Location: 16277-16924 bp Ori: ELD90639.1 Feature: domain Description: Tra5 Location: 16388-16898 bp Feature: domain Description: Tra5 Location: 163 88-16898 bp Feature: gene Location: 16921-17220 bp Ori: ELD90640.1 Feature: domain Description: InsE Location: 16948-17215 bp Feature: domain Description: InsE Location: 16948-17215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08181 (transposase; Validated), rve (pfam00665), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), InsE (COG2963)